RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 UIMC1Q96RL1 719 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 CHP1Q99653 195 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 GBP3Q9H0R5 595 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 ASCC2Q9H1I8 757 aaPredicted RBP6.05□□□□□ -1.44
ATG4A-208ENST00000489247 HAUS4Q9H6D7 363 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 TMEM206Q9H813 350 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 AGPAT3Q9NRZ7 376 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 RAD18Q9NS91 495 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 AGPAT5Q9NUQ2 364 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 ZNHIT6Q9NWK9 470 aaKnown RBP6.05□□□□□ -1.44
ATG4A-208ENST00000489247 AIPL1Q9NZN9 384 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 TBC1D7Q9P0N9 293 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 TCEAL9Q9UHQ7 104 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 DNAI1Q9UI46 699 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 KCNG1Q9UIX4 513 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 FZD1Q9UP38 647 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATG4A-208ENST00000489247 WDR90Q96KV7 1748 aa6.05□□□□□ -1.44
ATG4A-208ENST00000489247 KIF5CO60282 957 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 EIF4EBP3O60516 100 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 GFPT2O94808 682 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 SLU7O95391 586 aaKnown RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 SUPT20HL2P0C7V6 817 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 EPB41P11171 864 aaKnown RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 MYCLP12524 364 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 TFE3P19532 575 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 NMT1P30419 496 aaKnown RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 EIF4A3P38919 411 aaKnown RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 KLK7P49862 253 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 ALDH5A1P51649 535 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 ACTR2P61160 394 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 ZNF252P-AS1Q0IIN9 211 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 PWP1Q13610 501 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 XKR3Q5GH77 459 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 ODR4Q5SWX8 454 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 CDPF1Q6NVV7 123 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 MIS18BP1Q6P0N0 1132 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 KCNV1Q6PIU1 500 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 OTUD6AQ7L8S5 288 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 MTERF4Q7Z6M4 381 aaKnown RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 FMNL3Q8IVF7 1028 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 FAM20CQ8IXL6 584 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 TMEM161BQ8NDZ6 487 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 MCPH1Q8NEM0 835 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 NEK11Q8NG66 645 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 AFAP1L1Q8TED9 768 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 CPLX3Q8WVH0 158 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 EEF2KMTQ96G04 330 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 CLMNQ96JQ2 1002 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 RHOVQ96L33 236 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 FGD4Q96M96 766 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 FBXL18Q96ME1 805 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 ACCSQ96QU6 501 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 CEP89Q96ST8 783 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 DESI2Q9BSY9 194 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 SPON2Q9BUD6 331 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 TSGA10Q9BZW7 698 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 MROH8Q9H579 483 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 BCAS3Q9H6U6 928 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 NHEJ1Q9H9Q4 299 aaPredicted RBP6.04□□□□□ -1.44
ATG4A-208ENST00000489247 ARHGAP20Q9P2F6 1191 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 SLC9A2Q9UBY0 812 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 NENFQ9UMX5 172 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 AP4E1Q9UPM8 1137 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 RAXQ9Y2V3 346 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 PCDHB5Q9Y5E4 795 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 ACTL7BQ9Y614 415 aa6.04□□□□□ -1.44
ATG4A-208ENST00000489247 SYNGAP1Q96PV0 1343 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 SMCHD1A6NHR9 2005 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 ANO9A1A5B4 782 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 HMX2A2RU54 273 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 LRRC53A6NM62 1247 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 BTNL10A8MVZ5 291 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 H0YCG3 227 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 DDX39AO00148 427 aaKnown RBP6.03□□□□□ -1.44
ATG4A-208ENST00000489247 ZNF263O14978 683 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 GAS2O43903 313 aaKnown RBP6.03□□□□□ -1.44
ATG4A-208ENST00000489247 TLR2O60603 784 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 N4BP1O75113 896 aaKnown RBP6.03□□□□□ -1.44
ATG4A-208ENST00000489247 PIGRP01833 764 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 SERPING1P05155 500 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 PON1P27169 355 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 CASP4P49662 377 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 VAV2P52735 878 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 JAM2P57087 298 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 GNG11P61952 73 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 TUBB4BP68371 445 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 IRX3P78415 501 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-208ENST00000489247 AMPD2Q01433 879 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 NCBP1Q09161 790 aaKnown RBP6.03□□□□□ -1.44
ATG4A-208ENST00000489247 SNAPC2Q13487 334 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 CAMK2GQ13555 558 aaPredicted RBP6.03□□□□□ -1.44
ATG4A-208ENST00000489247 NEDD9Q14511 834 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 TARBP2Q15633 366 aaKnown RBP6.03□□□□□ -1.44
ATG4A-208ENST00000489247 EXOC3L4Q17RC7 722 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 KLHDC7AQ5VTJ3 777 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 FBXL19Q6PCT2 694 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 GBP6Q6ZN66 633 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 AGMOQ6ZNB7 445 aa6.03□□□□□ -1.44
ATG4A-208ENST00000489247 INTS8Q75QN2 995 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms