RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 BACE1P56817 501 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 MAGOHP61326 146 aaKnown RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 RIPK1Q13546 671 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 B3GNT9Q6UX72 402 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 ANKS1BQ7Z6G8 1248 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 TAX1BP1Q86VP1 789 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 LONP2Q86WA8 852 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 THNSL1Q8IYQ7 743 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 ZNF280CQ8ND82 737 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 ZNF564Q8TBZ8 553 aaPredicted RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 EPS8L3Q8TE67 593 aaKnown RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 RFFLQ8WZ73 363 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 KCNN1Q92952 543 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 SLC35B4Q969S0 331 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 RNF25Q96BH1 459 aaPredicted RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 OPTNQ96CV9 577 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 DTNBP1Q96EV8 351 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 SELENOSQ9BQE4 189 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 SEMA4AQ9H3S1 761 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 TAF1DQ9H5J8 278 aaPredicted RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 TTC7AQ9ULT0 858 aaPredicted RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 WDR64B1ANS9 1081 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 WDR46O15213 610 aaKnown RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 EIF3DO15371 548 aaKnown RBP eCLIP8.11□□□□□ -1.11
BEST3-205ENST00000488961 SLC16A3O15427 465 aaKnown RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 BANF1O75531 89 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 KRT10P13645 584 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 PRLRP16471 622 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 SP100P23497 879 aaPredicted RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 PCK1P35558 622 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 LIG4P49917 911 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 PSMC5P62195 406 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 DYNLT1P63172 113 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 IFI35P80217 286 aaPredicted RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 DR1Q01658 176 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 KBTBD12Q3ZCT8 623 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 CYP4A22Q5TCH4 519 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 FOXB2Q5VYV0 432 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 PCNX4Q63HM2 1172 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 OLFML1Q6UWY5 402 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 SYN2Q92777 582 aaPredicted RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 KIFAP3Q92845 792 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 JPH1Q9HDC5 661 aaPredicted RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 CHST7Q9NS84 486 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 DLGAP2Q9P1A6 1054 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 PNMA2Q9UL42 364 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 AGAP1Q9UPQ3 857 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 R3HDM2Q9Y2K5 976 aaKnown RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 PCDHA10Q9Y5I2 948 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 TRIP11Q15643 1979 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 CST3P01034 146 aaPredicted RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 FAM200BP0CF97 657 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 BCRP11274 1271 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 ETS1P14921 441 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 CYP11B1P15538 503 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 RPL21P46778 160 aaKnown RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 DYNC1I2Q13409 638 aaKnown RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 TMEM192Q8IY95 271 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 NETO2Q8NC67 525 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 FGD4Q96M96 766 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 RIT2Q99578 217 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 MOV10L1Q9BXT6 1211 aaKnown RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 NXF1Q9UBU9 619 aaKnown RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 ZNF214Q9UL59 606 aaPredicted RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 STK38LQ9Y2H1 464 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 STXBP5LQ9Y2K9 1186 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 TMEM98Q9Y2Y6 226 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 AFG3L2Q9Y4W6 797 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 DNAH14Q0VDD8 3507 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 F5H423 210 aaPredicted RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 GOLGA8SH3BPF8 625 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 GOLGA8MH3BSY2 632 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 PDLIM1O00151 329 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 B4GALT5O43286 388 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 TRAPPC3O43617 180 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 PFDN1O60925 122 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 KRT19P08727 400 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 ZSCAN5DPP0CG00 497 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 ZBTB48P10074 688 aaPredicted RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 ATP2A2P16615 1042 aaKnown RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 PRKCIP41743 596 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 BAG6P46379 1132 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 USP46P62068 366 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 ZNF844Q08AG5 666 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 LONRF1Q17RB8 773 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 SMTNL2Q2TAL5 461 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 CCDC137Q6PK04 289 aaKnown RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 CPLX4Q7Z7G2 160 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 IFNLR1Q8IU57 520 aaPredicted RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 IQCKQ8N0W5 287 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 KIF2BQ8N4N8 673 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 SCFD2Q8WU76 684 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 HES6Q96HZ4 224 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 ATP6V1G3Q96LB4 118 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 FAM81BQ96LP2 452 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 NLRP4Q96MN2 994 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 EDEM3Q9BZQ6 932 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 NACA2Q9H009 215 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 GPBP1L1Q9HC44 474 aaPredicted RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 PDGFCQ9NRA1 345 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms