RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 C1orf220Q5T0J3 134 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 ANKRD40Q6AI12 368 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 ISM2Q6H9L7 571 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 KIAA1841Q6NSI8 718 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 LRRC52Q8N7C0 313 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 TMC2Q8TDI7 906 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 ZNF516Q92618 1163 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 ANKRD36BP1Q96IX9 119 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 ZNF560Q96MR9 790 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 BACE2Q9Y5Z0 518 aa20.14■□□□□ 0.81
PTCD3-217ENST00000488801 ZNF638Q14966 1978 aaKnown RBP20.14■□□□□ 0.81
PTCD3-217ENST00000488801 PSMA7O14818 248 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 ADH1AP07327 375 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 TMEM191BP0C7N4 346 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 TYMPP19971 482 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 RPL13P26373 211 aaKnown RBP20.13■□□□□ 0.81
PTCD3-217ENST00000488801 POLR2BP30876 1174 aaKnown RBP20.13■□□□□ 0.81
PTCD3-217ENST00000488801 TAF6P49848 677 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 SKIV2LQ15477 1246 aaKnown RBP20.13■□□□□ 0.81
PTCD3-217ENST00000488801 DUOXA2Q1HG44 320 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 LEXMQ3ZCV2 418 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 VARS2Q5ST30 1063 aaKnown RBP20.13■□□□□ 0.81
PTCD3-217ENST00000488801 TTI2Q6NXR4 508 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 ANKS3Q6ZW76 656 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 PPFIBP1Q86W92 1011 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 POP1Q99575 1024 aaKnown RBP20.13■□□□□ 0.81
PTCD3-217ENST00000488801 IGFLR1Q9H665 355 aa20.13■□□□□ 0.81
PTCD3-217ENST00000488801 OAZ2O95190 189 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 MBD3O95983 291 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 CYP11A1P05108 521 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 DLATP10515 647 aaKnown RBP20.12■□□□□ 0.81
PTCD3-217ENST00000488801 RPL17P18621 184 aaKnown RBP20.12■□□□□ 0.81
PTCD3-217ENST00000488801 PNPLA4P41247 253 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 TFF2Q03403 129 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 ADAM9Q13443 819 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 STIM1Q13586 685 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 CEP135Q66GS9 1140 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 SLC8B1Q6J4K2 584 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 LILRA6Q6PI73 481 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 RSPO2Q6UXX9 243 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-217ENST00000488801 C15orf39Q6ZRI6 1047 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 TRAPPC11Q7Z392 1133 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 CEP57Q86XR8 500 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.12■□□□□ 0.81
PTCD3-217ENST00000488801 ATXN2LQ8WWM7 1075 aaKnown RBP20.12■□□□□ 0.81
PTCD3-217ENST00000488801 CCDC127Q96BQ5 260 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 FNBP1Q96RU3 617 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 DUSP9Q99956 384 aaKnown RBP20.12■□□□□ 0.81
PTCD3-217ENST00000488801 BARX2Q9UMQ3 279 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-217ENST00000488801 FRMD4BQ9Y2L6 1034 aa20.12■□□□□ 0.81
PTCD3-217ENST00000488801 PATJQ8NI35 1801 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 VCANP13611 3396 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 SLC16A3O15427 465 aaKnown RBP20.11■□□□□ 0.81
PTCD3-217ENST00000488801 ADAM12O43184 909 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 TNNC2P02585 160 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 EPCAMP16422 314 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 KCNA5P22460 613 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 DLG4P78352 724 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 SV2CQ496J9 727 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 INTS8Q75QN2 995 aaKnown RBP20.11■□□□□ 0.81
PTCD3-217ENST00000488801 LIMS2Q7Z4I7 341 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 SMRP1Q8NCR6 262 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 APPL2Q8NEU8 664 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 CASP10Q92851 521 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 SENP8Q96LD8 212 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 TSG101Q99816 390 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 GDAP2Q9NXN4 497 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 AGAP1Q9UPQ3 857 aa20.11■□□□□ 0.81
PTCD3-217ENST00000488801 IKBKBO14920 756 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 STAU1O95793 577 aaKnown RBP20.1■□□□□ 0.81
PTCD3-217ENST00000488801 C4BPAP04003 597 aaKnown RBP20.1■□□□□ 0.81
PTCD3-217ENST00000488801 TNNI1P19237 187 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 CA8P35219 290 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 PSMC2P35998 433 aaKnown RBP20.1■□□□□ 0.81
PTCD3-217ENST00000488801 AP3M2P53677 418 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 RBP5P82980 135 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 FKBP3Q00688 224 aaKnown RBP20.1■□□□□ 0.81
PTCD3-217ENST00000488801 BFSP1Q12934 665 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 RAB33AQ14088 237 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 TDRD10Q5VZ19 366 aaKnown RBP20.1■□□□□ 0.81
PTCD3-217ENST00000488801 ANKRD54Q6NXT1 300 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 SYCE2Q6PIF2 218 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 FAM186BQ8IYM0 893 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 CSGALNACT2Q8N6G5 542 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.1■□□□□ 0.81
PTCD3-217ENST00000488801 NELFBQ8WX92 580 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 MED15Q96RN5 788 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 DZANK1Q9NVP4 752 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 FBXW11Q9UKB1 542 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 CTNND2Q9UQB3 1225 aa20.1■□□□□ 0.81
PTCD3-217ENST00000488801 KPNA7A9QM74 516 aa20.09■□□□□ 0.81
PTCD3-217ENST00000488801 H3BQ06 376 aaPredicted RBP20.09■□□□□ 0.81
PTCD3-217ENST00000488801 CETN3O15182 167 aa20.09■□□□□ 0.81
PTCD3-217ENST00000488801 TGM5O43548 720 aa20.09■□□□□ 0.81
PTCD3-217ENST00000488801 GLUD1P00367 558 aa20.09■□□□□ 0.81
PTCD3-217ENST00000488801 SRGAP2BP0DMP2 458 aa20.09■□□□□ 0.81
PTCD3-217ENST00000488801 ODC1P11926 461 aa20.09■□□□□ 0.81
PTCD3-217ENST00000488801 KLRC2P26717 231 aa20.09■□□□□ 0.81
PTCD3-217ENST00000488801 PAK1Q13153 545 aa20.09■□□□□ 0.81
PTCD3-217ENST00000488801 ZACNQ401N2 412 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms