RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FBXW10Q5XX13 1052 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 MON1BQ7L1V2 547 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 PRRT2Q7Z6L0 340 aaPredicted RBP27.76■■■□□ 2.04
HLA-C-208ENST00000487245 BRSK2Q8IWQ3 736 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 IMPG2Q9BZV3 1241 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 HOMER3Q9NSC5 361 aa27.76■■■□□ 2.04
HLA-C-208ENST00000487245 GHRP10912 638 aa27.76■■■□□ 2.03
HLA-C-208ENST00000487245 RRM1P23921 792 aa27.76■■■□□ 2.03
HLA-C-208ENST00000487245 IFI35P80217 286 aaPredicted RBP27.76■■■□□ 2.03
HLA-C-208ENST00000487245 MXD4Q14582 209 aaPredicted RBP27.76■■■□□ 2.03
HLA-C-208ENST00000487245 SPOPLQ6IQ16 392 aa27.76■■■□□ 2.03
HLA-C-208ENST00000487245 SULF1Q8IWU6 871 aa27.76■■■□□ 2.03
HLA-C-208ENST00000487245 NLGN2Q8NFZ4 835 aa27.76■■■□□ 2.03
HLA-C-208ENST00000487245 DDX27Q96GQ7 796 aaKnown RBP27.76■■■□□ 2.03
HLA-C-208ENST00000487245 AAASQ9NRG9 546 aa27.76■■■□□ 2.03
HLA-C-208ENST00000487245 IVDP26440 423 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 GNA15P30679 374 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 NOP14P78316 857 aaKnown RBP27.75■■■□□ 2.03
HLA-C-208ENST00000487245 NCOA4Q13772 614 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 TAOK1Q7L7X3 1001 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 PHF13Q86YI8 300 aaPredicted RBP27.75■■■□□ 2.03
HLA-C-208ENST00000487245 WDR49Q8IV35 697 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 SNF8Q96H20 258 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 FAM84AQ96KN4 292 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 SELENOSQ9BQE4 189 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 OSBPL7Q9BZF2 842 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 DCLK3Q9C098 648 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 SCINQ9Y6U3 715 aa27.75■■■□□ 2.03
HLA-C-208ENST00000487245 H0YHG0 523 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 TOM1L1O75674 476 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 PROSCO94903 275 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 UBAP2Q5T6F2 1119 aaKnown RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 TMEM270Q6UE05 265 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 ZBTB8OSQ8IWT0 167 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 CCDC13Q8IYE1 715 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 RBBP8NLQ8NC74 664 aaPredicted RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 EPS8L3Q8TE67 593 aaKnown RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 C1orf54Q8WWF1 131 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 PRPF31Q8WWY3 499 aaKnown RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 SERPINB12Q96P63 405 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 JPH2Q9BR39 696 aaPredicted RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 C2orf40Q9H1Z8 148 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 KDM4CQ9H3R0 1056 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 PAPPA2Q9BXP8 1791 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 GOLGB1Q14789 3259 aaKnown RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 PSTPIP1O43586 416 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 LGR5O75473 907 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 CALCAP01258 141 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 NOMO3P69849 1222 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 C1QBPQ07021 282 aaKnown RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 ANKRD20A8PQ5CZ79 823 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 ZBTB41Q5SVQ8 909 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 CDCA2Q69YH5 1023 aaPredicted RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 PLPPR4Q7Z2D5 763 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 ERO1BQ86YB8 467 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 CDC42EP4Q9H3Q1 356 aaKnown RBP27.74■■■□□ 2.03
HLA-C-208ENST00000487245 ADAM22Q9P0K1 906 aa27.74■■■□□ 2.03
HLA-C-208ENST00000487245 UMODL1Q5DID0 1318 aa27.73■■■□□ 2.03
HLA-C-208ENST00000487245 GAS8O95995 478 aa27.73■■■□□ 2.03
HLA-C-208ENST00000487245 PIGWQ7Z7B1 504 aa27.73■■■□□ 2.03
HLA-C-208ENST00000487245 OR5B17Q8NGF7 314 aa27.73■■■□□ 2.03
HLA-C-208ENST00000487245 CCDC113Q9H0I3 377 aa27.73■■■□□ 2.03
HLA-C-208ENST00000487245 INTS9Q9NV88 658 aaKnown RBP27.73■■■□□ 2.03
HLA-C-208ENST00000487245 NUB1Q9Y5A7 615 aa27.73■■■□□ 2.03
HLA-C-208ENST00000487245 EDN1P05305 212 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 ITIH4Q14624 930 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 ATL2Q8NHH9 583 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.72■■■□□ 2.03
HLA-C-208ENST00000487245 CNKSR2Q8WXI2 1034 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 ASCC2Q9H1I8 757 aaPredicted RBP27.72■■■□□ 2.03
HLA-C-208ENST00000487245 CHST7Q9NS84 486 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 NEU2Q9Y3R4 380 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 GOLGA6L7A0A1B0GV03 622 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 MSCO60682 206 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 PEX10O60683 326 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 TCEA3O75764 348 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 CNMDO75829 334 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 KLF1Q13351 362 aaPredicted RBP27.72■■■□□ 2.03
HLA-C-208ENST00000487245 LY6KQ17RY6 165 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 CCDC197Q8NCU1 140 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 CCT6BQ92526 530 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 ACO2Q99798 780 aaKnown RBP27.72■■■□□ 2.03
HLA-C-208ENST00000487245 ASIC3Q9UHC3 531 aa27.72■■■□□ 2.03
HLA-C-208ENST00000487245 OGTO15294 1046 aa27.71■■■□□ 2.03
HLA-C-208ENST00000487245 CELF3Q5SZQ8 465 aaKnown RBP27.71■■■□□ 2.03
HLA-C-208ENST00000487245 PLEKHA7Q6IQ23 1121 aa27.71■■■□□ 2.03
HLA-C-208ENST00000487245 BBOF1Q8ND07 529 aa27.71■■■□□ 2.03
HLA-C-208ENST00000487245 GPR20Q99678 358 aa27.71■■■□□ 2.03
HLA-C-208ENST00000487245 TCHPQ9BT92 498 aa27.71■■■□□ 2.03
HLA-C-208ENST00000487245 LRRC37A2A6NM11 1700 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 IGKV6-21A0A0C4DH24 114 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 THAP12O43422 761 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 RASSF9O75901 435 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 ASS1P00966 412 aaKnown RBP27.7■■■□□ 2.03
HLA-C-208ENST00000487245 ATP5DP30049 168 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 LAMTOR4Q0VGL1 99 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 CNGA2Q16280 664 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 CCNG2Q16589 344 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 MAPK6Q16659 721 aa27.7■■■□□ 2.03
HLA-C-208ENST00000487245 RHOT1Q8IXI2 618 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms