RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 LAG3P18627 525 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 PAX3P23760 479 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 PBX3P40426 434 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 OR1G1P47890 313 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 BCAR1P56945 870 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 MLLT1Q03111 559 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-227ENST00000486806 LRMPQ12912 555 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 TBX2Q13207 712 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-227ENST00000486806 CUL2Q13617 745 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 WDR72Q3MJ13 1102 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 WDR44Q5JSH3 913 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 GJB7Q6PEY0 223 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 DCLRE1AQ6PJP8 1040 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 TMEM173Q86WV6 379 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-227ENST00000486806 RNF168Q8IYW5 571 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-227ENST00000486806 TDHQ8IZJ6 230 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 UBR7Q8N806 425 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 CCDC150Q8NCX0 1101 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 BCL7CQ8WUZ0 217 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-227ENST00000486806 RABGGTAQ92696 567 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 KAT5Q92993 513 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 TATDN2Q93075 761 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 IQCDQ96DY2 449 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 KREMEN1Q96MU8 473 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 ARID3AQ99856 593 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 BCO2Q9BYV7 579 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 GPR88Q9GZN0 384 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.76
MCF2L-227ENST00000486806 CEP72Q9P209 647 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 PRG3Q9Y2Y8 225 aaPredicted RBP10.28□□□□□ -0.76
MCF2L-227ENST00000486806 FHOD1Q9Y613 1164 aa10.28□□□□□ -0.76
MCF2L-227ENST00000486806 A0A1W2PQJ5 194 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 CARNS1A5YM72 827 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 GRXCR1A8MXD5 290 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 M0QZQ0 153 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 TRIM21P19474 475 aaKnown RBP10.27□□□□□ -0.77
MCF2L-227ENST00000486806 TBXAS1P24557 533 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-227ENST00000486806 RABGGTBP53611 331 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 JAM2P57087 298 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 TNNC1P63316 161 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 TRIM14Q14142 442 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 TIGD5Q53EQ6 642 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 ZNF667Q5HYK9 610 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 SMYD5Q6GMV2 418 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 KCNT2Q6UVM3 1135 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 ENOSF1Q7L5Y1 443 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 TMC6Q7Z403 805 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 SLC39A11Q8N1S5 342 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 PPM1KQ8N3J5 372 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 FIBCD1Q8N539 461 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 TOP6BLQ8N6T0 577 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 COLGALT1Q8NBJ5 622 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 NEK11Q8NG66 645 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 HASPINQ8TF76 798 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 BAP1Q92560 729 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 PDLIM2Q96JY6 352 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 SUSD3Q96L08 255 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 FAM81BQ96LP2 452 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 PCMTD1Q96MG8 357 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-227ENST00000486806 ZNF558Q96NG5 402 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 NUP58Q9BVL2 599 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 EDEM3Q9BZQ6 932 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 SDCBP2Q9H190 292 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 FAM124BQ9H5Z6 455 aaPredicted RBP10.27□□□□□ -0.77
MCF2L-227ENST00000486806 SMYD3Q9H7B4 428 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 NXF1Q9UBU9 619 aaKnown RBP10.27□□□□□ -0.77
MCF2L-227ENST00000486806 ADAM28Q9UKQ2 775 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 L1RE1Q9UN81 338 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 POLIQ9UNA4 740 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 R3HCC1Q9Y3T6 440 aaKnown RBP10.27□□□□□ -0.77
MCF2L-227ENST00000486806 PCDHA11Q9Y5I1 949 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.27□□□□□ -0.77
MCF2L-227ENST00000486806 SNX9Q9Y5X1 595 aa10.27□□□□□ -0.77
MCF2L-227ENST00000486806 LINC01553A4QN01 128 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 F8VZ95 297 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 RNF225M0QZC1 329 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 TACC1O75410 805 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 ALDH2P05091 517 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 CYP11A1P05108 521 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 P4HA1P13674 534 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 MYOGP15173 224 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 ACO1P21399 889 aaKnown RBP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 BRCC3P46736 316 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 ALDH7A1P49419 539 aaKnown RBP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 FXR1P51114 621 aaKnown RBP eCLIP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 POLR2FP61218 127 aaKnown RBP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 INCA1Q0VD86 236 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 ARID5BQ14865 1188 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 SOWAHAQ2M3V2 549 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 FUT10Q6P4F1 479 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 CHRDL2Q6WN34 429 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 SCARA5Q6ZMJ2 495 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 RRAGAQ7L523 313 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 DPH6Q7L8W6 267 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 PDCL2Q8N4E4 241 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 SPATA18Q8TC71 538 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 KBTBD7Q8WVZ9 684 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms