RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 NCOA4Q13772 614 aa20.53■□□□□ 0.88
ATG9A-221ENST00000486766 SMC1AQ14683 1233 aaKnown RBP20.53■□□□□ 0.88
ATG9A-221ENST00000486766 SCARA3Q6AZY7 606 aa20.53■□□□□ 0.88
ATG9A-221ENST00000486766 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.53■□□□□ 0.88
ATG9A-221ENST00000486766 IRF2BP1Q8IU81 584 aa20.53■□□□□ 0.88
ATG9A-221ENST00000486766 RNF168Q8IYW5 571 aaPredicted RBP20.53■□□□□ 0.88
ATG9A-221ENST00000486766 MYLIPQ8WY64 445 aa20.53■□□□□ 0.88
ATG9A-221ENST00000486766 HPDLQ96IR7 371 aa20.53■□□□□ 0.88
ATG9A-221ENST00000486766 SUSD3Q96L08 255 aa20.53■□□□□ 0.88
ATG9A-221ENST00000486766 B3GALT6Q96L58 329 aa20.53■□□□□ 0.88
ATG9A-221ENST00000486766 CDX2Q99626 313 aaPredicted RBP20.53■□□□□ 0.88
ATG9A-221ENST00000486766 TTPALQ9BTX7 342 aa20.53■□□□□ 0.88
ATG9A-221ENST00000486766 BECN2A8MW95 431 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 KPNA7A9QM74 516 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 KCNJ18B7U540 433 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 C2CD2LO14523 706 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 SPTLC1O15269 473 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 EFEMP2O95967 443 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 CST3P01034 146 aaPredicted RBP20.52■□□□□ 0.88
ATG9A-221ENST00000486766 CTSAP10619 480 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 ODC1P11926 461 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 TKTP29401 623 aaKnown RBP20.52■□□□□ 0.88
ATG9A-221ENST00000486766 AARSP49588 968 aaKnown RBP eCLIP20.52■□□□□ 0.88
ATG9A-221ENST00000486766 CAMK1Q14012 370 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 KCNJ12Q14500 433 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 PDE12Q6L8Q7 609 aaKnown RBP20.52■□□□□ 0.88
ATG9A-221ENST00000486766 C15orf39Q6ZRI6 1047 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 AUTS2Q8WXX7 1259 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 SENP8Q96LD8 212 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 GUCD1Q96NT3 240 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 NGRNQ9NPE2 291 aaKnown RBP20.52■□□□□ 0.88
ATG9A-221ENST00000486766 MRPL17Q9NRX2 175 aaKnown RBP20.52■□□□□ 0.88
ATG9A-221ENST00000486766 FANCLQ9NW38 375 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 MTMR10Q9NXD2 777 aa20.52■□□□□ 0.88
ATG9A-221ENST00000486766 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.51■□□□□ 0.87
ATG9A-221ENST00000486766 ARHGEF37A1IGU5 675 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 SMTNL1A8MU46 457 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 M0QZQ0 153 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 FSCN2O14926 492 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 SYN3O14994 580 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 N4BP1O75113 896 aaKnown RBP20.51■□□□□ 0.87
ATG9A-221ENST00000486766 VNN1O95497 513 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 CAVIN2O95810 425 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 HLA-DRAP01903 254 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 ATICP31939 592 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 IRS1P35568 1242 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 FMO5P49326 533 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 MYL6P60660 151 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 MYL7Q01449 175 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 ADGRE1Q14246 886 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 ZNF699Q32M78 642 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 CBWD6Q4V339 395 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 CBWD3Q5JTY5 395 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 CBWD5Q5RIA9 395 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 LRSAM1Q6UWE0 723 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 DHX40Q8IX18 779 aaKnown RBP20.51■□□□□ 0.87
ATG9A-221ENST00000486766 RIN2Q8WYP3 895 aaPredicted RBP20.51■□□□□ 0.87
ATG9A-221ENST00000486766 IMPG2Q9BZV3 1241 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 TSPY26PQ9H489 355 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 LMCD1Q9NZU5 365 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 PCDHB8Q9UN66 801 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 SSX2IPQ9Y2D8 614 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 PCDHGC5Q9Y5F6 944 aa20.51■□□□□ 0.87
ATG9A-221ENST00000486766 CYB561D2O14569 222 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 CXCL14O95715 111 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 AFPP02771 609 aaKnown RBP20.5■□□□□ 0.87
ATG9A-221ENST00000486766 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
ATG9A-221ENST00000486766 FOSL2P15408 326 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 FGFR3P22607 806 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 EEF1GP26641 437 aaKnown RBP20.5■□□□□ 0.87
ATG9A-221ENST00000486766 DSG1Q02413 1049 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 KCNH2Q12809 1159 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 PTPN14Q15678 1187 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 TCP11X2Q5H9J9 407 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 RTP2Q5QGT7 225 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 MICALL1Q8N3F8 863 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 CCDC150Q8NCX0 1101 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 FBXL13Q8NEE6 735 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 APPL2Q8NEU8 664 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 TAS1R2Q8TE23 839 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 CHST7Q9NS84 486 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 SNX9Q9Y5X1 595 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 MTCH2Q9Y6C9 303 aa20.5■□□□□ 0.87
ATG9A-221ENST00000486766 CDK11BP21127 795 aaKnown RBP20.49■□□□□ 0.87
ATG9A-221ENST00000486766 TNNC1P63316 161 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 CETN1Q12798 172 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 NCAPHQ15003 741 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 MAN2A1Q16706 1144 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 SGSM1Q2NKQ1 1148 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 CDKAL1Q5VV42 579 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 PDXDC1Q6P996 788 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 PRSS55Q6UWB4 352 aaPredicted RBP20.49■□□□□ 0.87
ATG9A-221ENST00000486766 ANKRD20A12PQ8NF67 263 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 PPP2R3CQ969Q6 453 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 TUBGCP2Q9BSJ2 902 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 NSUN3Q9H649 340 aaKnown RBP20.49■□□□□ 0.87
ATG9A-221ENST00000486766 CBX8Q9HC52 389 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.49■□□□□ 0.874e-11■■■■□ 25.6
ATG9A-221ENST00000486766 DSEQ9UL01 958 aa20.49■□□□□ 0.87
ATG9A-221ENST00000486766 TIMM13Q9Y5L4 95 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms