RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ZNF461Q8TAF7 563 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 LEO1Q8WVC0 666 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-208ENST00000486404 HPS3Q969F9 1004 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 MFSD14AQ96MC6 490 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 C7orf25Q9BPX7 421 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 CBWD1Q9BRT8 395 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 BLZF1Q9H2G9 400 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 CYP4F11Q9HBI6 524 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 RAPGEFL1Q9UHV5 662 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 RCOR1Q9UKL0 485 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 GOLGA8IPA6NC78 632 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 GOLGA8JA6NMD2 632 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 PPEF2O14830 753 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 KIAA0391O15091 583 aaKnown RBP13.94□□□□□ -0.18
CHMP3-208ENST00000486404 EXTL3O43909 919 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 TRIOO75962 3097 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 PAPLNO95428 1278 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 POU2F2P09086 479 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 PFKFB1P16118 471 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 AARSP49588 968 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHMP3-208ENST00000486404 TAF6P49848 677 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 TFAMQ00059 246 aaKnown RBP13.94□□□□□ -0.18
CHMP3-208ENST00000486404 TPGS2Q68CL5 300 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 OVOS1Q6IE37 1185 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 CNNM4Q6P4Q7 775 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 RTL10Q7L3V2 364 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 HS2ST1Q7LGA3 356 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 GPD1LQ8N335 351 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 ELMOD1Q8N336 334 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 PBXIP1Q96AQ6 731 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 OXCT2Q9BYC2 517 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-208ENST00000486404 SCAND2PQ9GZW5 306 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-208ENST00000486404 PCIF1Q9H4Z3 704 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 EXOC1Q9NV70 894 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 DPP3Q9NY33 737 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHMP3-208ENST00000486404 DSEQ9UL01 958 aa13.94□□□□□ -0.18
CHMP3-208ENST00000486404 R3HCC1Q9Y3T6 440 aaKnown RBP13.94□□□□□ -0.18
CHMP3-208ENST00000486404 TIMM13Q9Y5L4 95 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-208ENST00000486404 OR6C75A6NL08 312 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 N4BP1O75113 896 aaKnown RBP13.93□□□□□ -0.18
CHMP3-208ENST00000486404 TMEM191BP0C7N4 346 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 SLFN14P0C7P3 912 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 ATF2P15336 505 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 TYMPP19971 482 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 CASP1P29466 404 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 LILRA4P59901 499 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 TDGQ13569 410 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 SV2CQ496J9 727 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 PABPC1LQ4VXU2 614 aaKnown RBP13.93□□□□□ -0.18
CHMP3-208ENST00000486404 CRELD2Q6UXH1 353 aaPredicted RBP13.93□□□□□ -0.18
CHMP3-208ENST00000486404 METTL23Q86XA0 190 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 NELFCDQ8IXH7 590 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 EFCAB13Q8IY85 973 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 GRAMD1CQ8IYS0 662 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 GLIS3Q8NEA6 775 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 CACTINQ8WUQ7 758 aaKnown RBP13.93□□□□□ -0.18
CHMP3-208ENST00000486404 SENP8Q96LD8 212 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 MYADMQ96S97 322 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 IGSF9Q9P2J2 1179 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 EPS15L1Q9UBC2 864 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 SERTAD1Q9UHV2 236 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 ZDHHC9Q9Y397 364 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 INSL5Q9Y5Q6 135 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 ZNF318Q5VUA4 2279 aa13.93□□□□□ -0.18
CHMP3-208ENST00000486404 NOTCH4Q99466 2003 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 A0A1B0GVL5 298 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 PVALEFA0A1B0GWK0 134 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 ACTN4O43707 911 aaKnown RBP13.92□□□□□ -0.18
CHMP3-208ENST00000486404 ABLIM3O94929 683 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 PNPLA4P41247 253 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 NTHL1P78549 312 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 ADCY1Q08828 1119 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 PLD1Q13393 1074 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 CUL4BQ13620 913 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 MRPL58Q14197 206 aaKnown RBP13.92□□□□□ -0.18
CHMP3-208ENST00000486404 TCEAL8Q8IYN2 117 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 ZSWIM2Q8NEG5 633 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 ANKRD36BP1Q96IX9 119 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 KCNK12Q9HB15 430 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 HCFC1R1Q9NWW0 138 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 HSPBP1Q9NZL4 362 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 AFF4Q9UHB7 1163 aaKnown RBP13.92□□□□□ -0.18
CHMP3-208ENST00000486404 FBXL21Q9UKT6 434 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 MAFFQ9ULX9 164 aa13.92□□□□□ -0.18
CHMP3-208ENST00000486404 ZFP37Q9Y6Q3 630 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-208ENST00000486404 ANO9A1A5B4 782 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 PIRO00625 290 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 TBC1D4O60343 1298 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 OAZ2O95190 189 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 ITGB3P05106 788 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 KRT19P08727 400 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 OR4Q2P0C623 313 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 LAMP2P13473 410 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 RFX1P22670 979 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 CMA1P23946 247 aa13.91□□□□□ -0.18
CHMP3-208ENST00000486404 POLR2BP30876 1174 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms