RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 GPRC5CQ9NQ84 441 aa10.12□□□□□ -0.79
CCDC142-208ENST00000486335 DSPP15924 2871 aaKnown RBP10.12□□□□□ -0.79
CCDC142-208ENST00000486335 CELSR3Q9NYQ7 3312 aa10.12□□□□□ -0.79
CCDC142-208ENST00000486335 SPAG17Q6Q759 2223 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 GREB1Q4ZG55 1949 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 MYBPHLA2RUH7 354 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 SRRM3A6NNA2 597 aaPredicted RBP10.11□□□□□ -0.79
CCDC142-208ENST00000486335 HEPACAM2A8MVW5 462 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 TBX3O15119 743 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 TRAK2O60296 914 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 EPN2O95208 641 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 LYPLA2O95372 231 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 ATF2P15336 505 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 PXNP49023 591 aaPredicted RBP10.11□□□□□ -0.79
CCDC142-208ENST00000486335 UBE2HP62256 183 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 CYP4A11Q02928 519 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 CCINQ13939 588 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 SLC39A14Q15043 492 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 PTPAQ15257 358 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 FAM187BQ17R55 369 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 KLHL40Q2TBA0 621 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 CDCA2Q69YH5 1023 aaPredicted RBP10.11□□□□□ -0.79
CCDC142-208ENST00000486335 IL31Q6EBC2 164 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 PPP4R3AQ6IN85 833 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 TCEAL8Q8IYN2 117 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 TMEM130Q8N3G9 435 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 BSNDQ8WZ55 320 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 SPATA32Q96LK8 384 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 MKNK1Q9BUB5 465 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 TRIM6Q9C030 488 aaPredicted RBP10.11□□□□□ -0.79
CCDC142-208ENST00000486335 ZSWIM4Q9H7M6 989 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 GDPD2Q9HCC8 539 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 LOC400499M0QZD8 3231 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 FLNBO75369 2602 aaKnown RBP10.11□□□□□ -0.79
CCDC142-208ENST00000486335 TICRRQ7Z2Z1 1910 aa10.11□□□□□ -0.79
CCDC142-208ENST00000486335 PCNX2A6NKB5 2137 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 ASXL3Q9C0F0 2248 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 FAM205CA6NFA0 338 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 WNT7AO00755 349 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 PPP6R2O75170 966 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 B3GAT3O94766 335 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 MBD3O95983 291 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 CAPNS1P04632 268 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 RARRES1P49788 294 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 RING1Q06587 406 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 FCHO2Q0JRZ9 810 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 ELAVL2Q12926 359 aaKnown RBP10.1□□□□□ -0.79
CCDC142-208ENST00000486335 TEAD2Q15562 447 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 AASDHQ4L235 1098 aaPredicted RBP10.1□□□□□ -0.79
CCDC142-208ENST00000486335 GLRA4Q5JXX5 417 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 PSAPL1Q6NUJ1 521 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 LRSAM1Q6UWE0 723 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 OTUD6AQ7L8S5 288 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 KRT25Q7Z3Z0 450 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 TPH2Q8IWU9 490 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 SHKBP1Q8TBC3 707 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 ZSCAN18Q8TBC5 510 aaPredicted RBP10.1□□□□□ -0.79
CCDC142-208ENST00000486335 LOXL4Q96JB6 756 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 CCDC113Q9H0I3 377 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 POLR3FQ9H1D9 316 aaPredicted RBP10.1□□□□□ -0.79
CCDC142-208ENST00000486335 DNAJC25Q9H1X3 360 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 CRISPLD1Q9H336 500 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 CLIC4Q9Y696 253 aa10.1□□□□□ -0.79
CCDC142-208ENST00000486335 SETXQ7Z333 2677 aaKnown RBP10.09□□□□□ -0.79
CCDC142-208ENST00000486335 SLC38A8A6NNN8 435 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 SPECC1L-ADORA2AF8WAN1 911 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 TAF4O00268 1085 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 ZNF263O14978 683 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 SPTLC2O15270 562 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 FOXD2O60548 495 aaPredicted RBP10.09□□□□□ -0.79
CCDC142-208ENST00000486335 GADD45BO75293 160 aaPredicted RBP10.09□□□□□ -0.79
CCDC142-208ENST00000486335 BMP15O95972 392 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 CTHP32929 405 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 CACNB1Q02641 598 aaPredicted RBP10.09□□□□□ -0.79
CCDC142-208ENST00000486335 ORC2Q13416 577 aaPredicted RBP10.09□□□□□ -0.79
CCDC142-208ENST00000486335 TFDP1Q14186 410 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 NBR1Q14596 966 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 PPP2R5DQ14738 602 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 SF3A1Q15459 793 aaKnown RBP10.09□□□□□ -0.79
CCDC142-208ENST00000486335 XKR4Q5GH76 650 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 STXBP5Q5T5C0 1151 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 NT5DC1Q5TFE4 455 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 ADALQ6DHV7 355 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 NCAPH2Q6IBW4 605 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 PDXDC1Q6P996 788 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 ANKS3Q6ZW76 656 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 POTEDQ86YR6 584 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 TMC8Q8IU68 726 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 HACE1Q8IYU2 909 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 TTC8Q8TAM2 541 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 GPT2Q8TD30 523 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 PIGOQ8TEQ8 1089 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 DEPDC1BQ8WUY9 529 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 GAB3Q8WWW8 586 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 ZFYVE19Q96K21 471 aa10.09□□□□□ -0.79
CCDC142-208ENST00000486335 ZC3H10Q96K80 434 aaKnown RBP10.09□□□□□ -0.79
CCDC142-208ENST00000486335 ZMAT2Q96NC0 199 aaKnown RBP10.09□□□□□ -0.79
CCDC142-208ENST00000486335 EIF2AK1Q9BQI3 630 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms