RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 VCPKMTQ9H867 229 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SH3GLB2Q9NR46 395 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 XPO7Q9UIA9 1087 aaKnown RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 CLCA2Q9UQC9 943 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SLC16A2P36021 539 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 RECQLP46063 649 aaPredicted RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 PEX3P56589 373 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 PLIN5Q00G26 463 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 NME3Q13232 169 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 KIAA1841Q6NSI8 718 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 IFNEQ86WN2 208 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 RAB42Q8N4Z0 105 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ZNF513Q8N8E2 541 aaPredicted RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 REXO4Q9GZR2 422 aaKnown RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 PARVAQ9NVD7 372 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 FAM25AB3EWG3 89 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 FAM25CB3EWG5 89 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 FAM25GB3EWG6 89 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 SUPT3HB4E1H0 165 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 PSMD3O43242 534 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 LARGE1O95461 756 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 KCNH2Q12809 1159 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 LAMC2Q13753 1193 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 TNFAIP1Q13829 316 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 ILDR1Q86SU0 546 aaPredicted RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 ZNF589Q86UQ0 364 aaPredicted RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 KIRREL3Q8IZU9 778 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 C4orf33Q8N1A6 199 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 ATL2Q8NHH9 583 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 NOL6Q9H6R4 1146 aaKnown RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 MRGBPQ9NV56 204 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 HPS5Q9UPZ3 1129 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 KLHL20Q9Y2M5 609 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 KCNN4O15554 427 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 ZNF200P98182 395 aaPredicted RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 C6orf10Q5SRN2 563 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 C12orf60Q5U649 245 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 BNIPLQ7Z465 357 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 ANKRD7Q92527 254 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 CATSPER2Q96P56 530 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 TRIM51Q9BSJ1 452 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 TASP1Q9H6P5 420 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 EPS8L2Q9H6S3 715 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 TRIM39Q9HCM9 518 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 TRPC7Q9HCX4 862 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 PFASO15067 1338 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 CPA2P48052 419 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 PUDPQ08623 228 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 PTK7Q13308 1070 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 DRAP1Q14919 205 aaPredicted RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 Q3C1V9 767 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 EFHC2Q5JST6 749 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 MEI1Q5TIA1 1274 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 DCAF15Q66K64 600 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 OR6P1Q8NGX9 317 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 RNPC3Q96LT9 517 aaKnown RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 OLFM1Q99784 485 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 UVRAGQ9P2Y5 699 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 ADGRA2Q96PE1 1338 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 SAC3D1A6NKF1 404 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 TBXAS1P24557 533 aaPredicted RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 SDC4P31431 198 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 PPP3CCP48454 512 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 OASLQ15646 514 aaKnown RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 LRRC24Q50LG9 513 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 ATAD3BQ5T9A4 648 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 C11orf88Q6PI97 169 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 SNX31Q8N9S9 440 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 WDR48Q8TAF3 677 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 WNK4Q96J92 1243 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 GPR101Q96P66 508 aaPredicted RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 FAM129AQ9BZQ8 928 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 AP5M1Q9H0R1 490 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 KRCC1Q9NPI7 259 aaPredicted RBP9.17□□□□□ -0.94
GABRE-209ENST00000486255 SOAT1P35610 550 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 COPAP53621 1224 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 BCAR1P56945 870 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 TNFAIP2Q03169 654 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 COASYQ13057 564 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 COBLL1Q53SF7 1204 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 CHMP1BQ7LBR1 199 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 KRT77Q7Z794 578 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 RCOR2Q8IZ40 523 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 OR2W6PQ8NHA6 318 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 SEPT1Q8WYJ6 367 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 RBBP8Q99708 897 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 PPCSQ9HAB8 311 aa9.17□□□□□ -0.94
GABRE-209ENST00000486255 SMAPO00193 183 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 PSTPIP1O43586 416 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 ATP9AO75110 1047 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 SMNDC1O75940 238 aaKnown RBP eCLIP9.16□□□□□ -0.948e-7■□□□□ 8.5
GABRE-209ENST00000486255 ITIH2P19823 946 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 NUDT2P50583 147 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 VAMP7P51809 220 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 NCALDP61601 193 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 RCSD1Q6JBY9 416 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 LCORLQ8N3X6 602 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 CENPTQ96BT3 561 aa9.16□□□□□ -0.94
GABRE-209ENST00000486255 MXD3Q9BW11 206 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms