RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 C2orf40Q9H1Z8 148 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 CDT1Q9H211 546 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 PLEKHA4Q9H4M7 779 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 SCUBE2Q9NQ36 999 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 KBTBD4Q9NVX7 518 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 FBXW11Q9UKB1 542 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 POLIQ9UNA4 740 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 NUMBLQ9Y6R0 609 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 PTPRZ1P23471 2315 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 NPHP3-ACAD11A0A0J9YXS1 232 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 SMIM28A0A1B0GU29 152 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 ABLIM1O14639 778 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 AP5Z1O43299 807 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 ZNF500O60304 480 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 C8AP07357 584 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 HARSP12081 509 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 GLULP15104 373 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 FSHRP23945 695 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 CLCN1P35523 988 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 GSDMDP57764 484 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 GPC5P78333 572 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 HTR4Q13639 388 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 KRT79Q5XKE5 535 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 RINT1Q6NUQ1 792 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 CNNM4Q6P4Q7 775 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 ERMNQ8TAM6 284 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 SLC7A14Q8TBB6 771 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 LRRC15Q8TF66 581 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 ING5Q8WYH8 240 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 PIK3R5Q8WYR1 880 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 ERCC4Q92889 916 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 DDX27Q96GQ7 796 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 PNMA5Q96PV4 448 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 ACO2Q99798 780 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 PLA2G2FQ9BZM2 168 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 FOXQ1Q9C009 403 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 PTPRHQ9HD43 1115 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 ZDHHC7Q9NXF8 308 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 IGSF9Q9P2J2 1179 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 DNMT3BQ9UBC3 853 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 STK39Q9UEW8 545 aa10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 SF3B1O75533 1304 aaKnown RBP eCLIP10.22□□□□□ -0.77
TMEM39A-208ENST00000486159 TPRP12270 2363 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 PRR23AA6NEV1 266 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 ANHXE9PGG2 379 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 K7ERI5 159 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 SLC16A4O15374 487 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 B3GAT3O94766 335 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 FGFR3P22607 806 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 NBL1P41271 181 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 AFMP43652 599 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 SPAG1Q07617 926 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 KARSQ15046 597 aaKnown RBP10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 ANGPT1Q15389 498 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 UPP1Q16831 310 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 SLC5A9Q2M3M2 681 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 PPM1LQ5SGD2 360 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 HYIQ5T013 277 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 ZNF658Q5TYW1 1059 aaPredicted RBP10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 SPATA1Q5VX52 437 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 ALKAL1Q6UXT8 129 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 C1orf186Q6ZWK4 172 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 DRC7Q8IY82 874 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 CCDC105Q8IYK2 499 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 DTWD2Q8NBA8 298 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 TMC2Q8TDI7 906 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 HDAC7Q8WUI4 952 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 FGF13Q92913 245 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 CDK5RAP3Q96JB5 506 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 IFT74Q96LB3 600 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 C7orf25Q9BPX7 421 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 KXD1Q9BQD3 176 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 ADPGKQ9BRR6 497 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 RHOBTB2Q9BYZ6 727 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 HAPLN2Q9GZV7 340 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 TBC1D17Q9HA65 648 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 MTF2Q9Y483 593 aaPredicted RBP10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 CDY1Q9Y6F8 540 aa10.21□□□□□ -0.77
TMEM39A-208ENST00000486159 KMT2BQ9UMN6 2715 aaPredicted RBP10.21□□□□□ -0.78
TMEM39A-208ENST00000486159 PVALEFA0A1B0GWK0 134 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 PROB1E7EW31 1015 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 RHOBTB3O94955 611 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 SEC24AO95486 1093 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 RPN1P04843 607 aaKnown RBP10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 SRFP11831 508 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 CD72P21854 359 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 BMP6P22004 513 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 CDR1P51861 262 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 ARPP19P56211 112 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 STIM1Q13586 685 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 RAB33AQ14088 237 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 ZNF568Q3ZCX4 644 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 COBLL1Q53SF7 1204 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 XKR4Q5GH76 650 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 HAUS3Q68CZ6 603 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 DCLRE1AQ6PJP8 1040 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 SV2BQ7L1I2 683 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 GPR65Q8IYL9 337 aa10.2□□□□□ -0.78
TMEM39A-208ENST00000486159 STAMQ92783 540 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms