RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ADCY1Q08828 1119 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 TDGQ13569 410 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 CUL4BQ13620 913 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 NELFCDQ8IXH7 590 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 ING5Q8WYH8 240 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 FAM84AQ96KN4 292 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 C7orf25Q9BPX7 421 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 RHOBTB2Q9BYZ6 727 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL6A1-204ENST00000486023 DNMT3BQ9UBC3 853 aaKnown RBP19.11■□□□□ 0.65
COL6A1-204ENST00000486023 DERAQ9Y315 318 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.11■□□□□ 0.65
COL6A1-204ENST00000486023 NARSO43776 548 aaKnown RBP19.1■□□□□ 0.65
COL6A1-204ENST00000486023 ABLIM3O94929 683 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 LDHAP00338 332 aaKnown RBP19.1■□□□□ 0.65
COL6A1-204ENST00000486023 ODC1P11926 461 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 LAMP2P13473 410 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 ATF2P15336 505 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 WNT7BP56706 349 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 BECN1Q14457 450 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 PABPC1LQ4VXU2 614 aaKnown RBP19.1■□□□□ 0.65
COL6A1-204ENST00000486023 FAM26FQ5R3K3 315 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 OVOS1Q6IE37 1185 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 RNF19BQ6ZMZ0 732 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 EFCAB13Q8IY85 973 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 RDH13Q8NBN7 331 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 ITFG1Q8TB96 612 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 LEO1Q8WVC0 666 aaPredicted RBP19.1■□□□□ 0.65
COL6A1-204ENST00000486023 ASIC4Q96FT7 647 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 CORO1BQ9BR76 489 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 MFSD1Q9H3U5 465 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 SLC39A2Q9NP94 309 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 FBXL21Q9UKT6 434 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 C2CD2Q9Y426 696 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 CITO14578 2027 aa19.1■□□□□ 0.65
COL6A1-204ENST00000486023 PIRO00625 290 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 CYB561D2O14569 222 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 EXTL3O43909 919 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 KRT19P08727 400 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 HOXA9P31269 272 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 UNC13DQ70J99 1090 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 FBXL6Q8N531 539 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 PYM1Q9BRP8 204 aaKnown RBP19.09■□□□□ 0.65
COL6A1-204ENST00000486023 MAGEF1Q9HAY2 307 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 PDE11AQ9HCR9 933 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 IGSF9Q9P2J2 1179 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 MRPS23Q9Y3D9 190 aaKnown RBP19.09■□□□□ 0.65
COL6A1-204ENST00000486023 VWA8A3KMH1 1905 aa19.09■□□□□ 0.65
COL6A1-204ENST00000486023 ANO9A1A5B4 782 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 CLIC2O15247 247 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 OAZ2O95190 189 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 CFHP08603 1231 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 PFKFB1P16118 471 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 PTPN2P17706 415 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 TAF6P49848 677 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 TWF1Q12792 350 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 TPGS2Q68CL5 300 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 LMBRD2Q68DH5 695 aaPredicted RBP19.08■□□□□ 0.64
COL6A1-204ENST00000486023 BMP8AQ7Z5Y6 402 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 METTL23Q86XA0 190 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 BRSK2Q8IWQ3 736 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 GPD1LQ8N335 351 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 CSGALNACT2Q8N6G5 542 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 CACTINQ8WUQ7 758 aaKnown RBP19.08■□□□□ 0.64
COL6A1-204ENST00000486023 FGF13Q92913 245 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 MCRS1Q96EZ8 462 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 PAGE5Q96GU1 130 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 TMEM209Q96SK2 561 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 EPS15L1Q9UBC2 864 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 AFF4Q9UHB7 1163 aaKnown RBP19.08■□□□□ 0.64
COL6A1-204ENST00000486023 CDH7Q9ULB5 785 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 AGAP1Q9UPQ3 857 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 SLC27A5Q9Y2P5 690 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 INSL5Q9Y5Q6 135 aa19.08■□□□□ 0.64
COL6A1-204ENST00000486023 STK25O00506 426 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 ITGB3P05106 788 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 RHOP08100 348 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 POLR2BP30876 1174 aaKnown RBP19.07■□□□□ 0.64
COL6A1-204ENST00000486023 HOXD13P35453 343 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 AARSP49588 968 aaKnown RBP eCLIP19.07■□□□□ 0.64
COL6A1-204ENST00000486023 CYP2J2P51589 502 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 DUSP4Q13115 394 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 CBWD2Q8IUF1 395 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 TCEAL8Q8IYN2 117 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 ELMOD1Q8N336 334 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 SLC44A3Q8N4M1 653 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 FLCNQ8NFG4 579 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 ZNF507Q8TCN5 953 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 FAM122AQ96E09 287 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 ZNF512Q96ME7 567 aaPredicted RBP19.07■□□□□ 0.64
COL6A1-204ENST00000486023 GDPD2Q9HCC8 539 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 HSPBP1Q9NZL4 362 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 R3HCC1Q9Y3T6 440 aaKnown RBP19.07■□□□□ 0.64
COL6A1-204ENST00000486023 ATP6V1DQ9Y5K8 247 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 NUMBLQ9Y6R0 609 aa19.07■□□□□ 0.64
COL6A1-204ENST00000486023 C2orf16Q68DN1 1984 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 TECTAO75443 2155 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 ZNF233A6NK53 670 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 OR6C75A6NL08 312 aa19.06■□□□□ 0.64
COL6A1-204ENST00000486023 PAPLNO95428 1278 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms