RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 NYAP1Q6ZVC0 841 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 CACNA2D4Q7Z3S7 1137 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 C17orf53Q8N3J3 647 aaPredicted RBP12.16□□□□□ -0.46
SND1-212ENST00000485871 LRRC52Q8N7C0 313 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 OR8K1Q8NGG5 319 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 OLIG1Q8TAK6 271 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 SHC3Q92529 594 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 TAF4BQ92750 862 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 SYN2Q92777 582 aaPredicted RBP12.16□□□□□ -0.46
SND1-212ENST00000485871 FAXDC2Q96IV6 333 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 ARID3AQ99856 593 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 BAG1Q99933 345 aaPredicted RBP12.16□□□□□ -0.46
SND1-212ENST00000485871 GOLGA2P5Q9HBQ8 144 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.16□□□□□ -0.467e-9■■■■■ 70.3
SND1-212ENST00000485871 AIPL1Q9NZN9 384 aa12.16□□□□□ -0.46
SND1-212ENST00000485871 UQCRHLA0A096LP55 91 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 ABHD14A-ACY1A0A1B0GW23 586 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
SND1-212ENST00000485871 XPOTO43592 962 aaKnown RBP12.15□□□□□ -0.46
SND1-212ENST00000485871 B4GALT3O60512 393 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 THP07101 528 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 UQCRHP07919 91 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 PFKMP08237 780 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 PNMA6AP0CW24 399 aaPredicted RBP12.15□□□□□ -0.46
SND1-212ENST00000485871 FGFR1P11362 822 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 COL9A1P20849 921 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 ACO1P21399 889 aaKnown RBP12.15□□□□□ -0.46
SND1-212ENST00000485871 ATICP31939 592 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 ASPAP45381 313 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 RBP5P82980 135 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 CDK17Q00537 523 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 DSC1Q08554 894 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 GRIK3Q13003 919 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 CUL2Q13617 745 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 ZNF699Q32M78 642 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 HGSNATQ68CP4 663 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 C16orf59Q7L2K0 433 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 RRAGAQ7L523 313 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 ENOSF1Q7L5Y1 443 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 TMEM199Q8N511 208 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 MAFAQ8NHW3 353 aaPredicted RBP12.15□□□□□ -0.46
SND1-212ENST00000485871 JAKMIP2Q96AA8 810 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 RPS6KC1Q96S38 1066 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
SND1-212ENST00000485871 BCO2Q9BYV7 579 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 NIF3L1Q9GZT8 377 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.46
SND1-212ENST00000485871 IL23AQ9NPF7 189 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 SLC38A7Q9NVC3 462 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 AGAP1Q9UPQ3 857 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 CNTN6Q9UQ52 1028 aa12.15□□□□□ -0.46
SND1-212ENST00000485871 VWA8A3KMH1 1905 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 KRT19P08727 400 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 IGFBP6P24592 240 aaPredicted RBP12.14□□□□□ -0.47
SND1-212ENST00000485871 SOX5P35711 763 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 PRKCIP41743 596 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 TRPC3Q13507 836 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 RAPGEF1Q13905 1077 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 IKBKEQ14164 716 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 WDR44Q5JSH3 913 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 SMYD5Q6GMV2 418 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 CD300LGQ6UXG3 332 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 LIMS2Q7Z4I7 341 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 IRF2BP2Q7Z5L9 587 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 NPAS4Q8IUM7 802 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 FAM71AQ8IYT1 594 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 PPM1KQ8N3J5 372 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 KIF18AQ8NI77 898 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 HPDLQ96IR7 371 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 FAM81BQ96LP2 452 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 C16orf45Q96MC5 204 aaPredicted RBP12.14□□□□□ -0.47
SND1-212ENST00000485871 CASD1Q96PB1 797 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 CHP1Q99653 195 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 SYT11Q9BT88 431 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 SDCBP2Q9H190 292 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 NUCKS1Q9H1E3 243 aaKnown RBP12.14□□□□□ -0.47
SND1-212ENST00000485871 RC3H2Q9HBD1 1191 aaKnown RBP12.14□□□□□ -0.47
SND1-212ENST00000485871 ARHGAP20Q9P2F6 1191 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 CACNG4Q9UBN1 327 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 POLIQ9UNA4 740 aa12.14□□□□□ -0.47
SND1-212ENST00000485871 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.14□□□□□ -0.47
SND1-212ENST00000485871 FOXN3O00409 490 aaPredicted RBP12.13□□□□□ -0.47
SND1-212ENST00000485871 SPTLC1O15269 473 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 DDHD2O94830 711 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 POMCP01189 267 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 ACRP10323 421 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 TBXAS1P24557 533 aaPredicted RBP12.13□□□□□ -0.47
SND1-212ENST00000485871 GATMP50440 423 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 EPHB4P54760 987 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 MFAP3P55082 362 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 DEFB103AP81534 67 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 TUSC3Q13454 348 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 ARHGAP44Q17R89 818 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 ASTE1Q2TB18 679 aaPredicted RBP12.13□□□□□ -0.47
SND1-212ENST00000485871 ZNF667Q5HYK9 610 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 NOMO2Q5JPE7 1267 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 SFMBT2Q5VUG0 894 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
SND1-212ENST00000485871 MTERF4Q7Z6M4 381 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms