RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CCL16O15467 120 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 TGFB1I1O43294 461 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 EXOC3O60645 756 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 XYLBO75191 536 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 ZMYND10O75800 440 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 TNNC2P02585 160 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 POLR2BP30876 1174 aaKnown RBP13.52□□□□□ -0.25
PTCD1-205ENST00000485746 HOXD13P35453 343 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 LILRA4P59901 499 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 EHHADHQ08426 723 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 STK4Q13043 487 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 SV2CQ496J9 727 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 RSPO2Q6UXX9 243 aaPredicted RBP13.52□□□□□ -0.25
PTCD1-205ENST00000485746 CBWD2Q8IUF1 395 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 XXYLT1Q8NBI6 393 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 SLC7A14Q8TBB6 771 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 OXCT2Q9BYC2 517 aaPredicted RBP13.52□□□□□ -0.25
PTCD1-205ENST00000485746 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 FBXL5Q9UKA1 691 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 DSEQ9UL01 958 aa13.52□□□□□ -0.25
PTCD1-205ENST00000485746 ANO9A1A5B4 782 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 C2CD4DB7Z1M9 353 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 M0QZQ0 153 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 PIRO00625 290 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 DCXO43602 365 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 CALUO43852 315 aaPredicted RBP13.51□□□□□ -0.25
PTCD1-205ENST00000485746 CLSTN1O94985 981 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 LRG1P02750 347 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 ITGB3P05106 788 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 HNRNPA1P09651 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTCD1-205ENST00000485746 DLATP10515 647 aaKnown RBP13.51□□□□□ -0.25
PTCD1-205ENST00000485746 TNNI1P19237 187 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 GBP2P32456 591 aaPredicted RBP13.51□□□□□ -0.25
PTCD1-205ENST00000485746 PNPLA4P41247 253 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 RBP5P82980 135 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 ROR1Q01973 937 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 BFSP1Q12934 665 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 SNRNP35Q16560 246 aaKnown RBP13.51□□□□□ -0.25
PTCD1-205ENST00000485746 DUOXA2Q1HG44 320 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 UVSSAQ2YD98 709 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 LMBRD2Q68DH5 695 aaPredicted RBP13.51□□□□□ -0.25
PTCD1-205ENST00000485746 OVOS1Q6IE37 1185 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 OTOP3Q7RTS5 596 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 THEM5Q8N1Q8 247 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 ZNF461Q8TAF7 563 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 C1QTNF1Q9BXJ1 281 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 EPHX3Q9H6B9 360 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 CYP4F11Q9HBI6 524 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 MUTYHQ9UIF7 546 aa13.51□□□□□ -0.25
PTCD1-205ENST00000485746 A0A0C4DFX4 3053 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 OR6C75A6NL08 312 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 PI4K2BG5E9Z4 385 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 PRPF40AO75400 957 aaKnown RBP13.5□□□□□ -0.25
PTCD1-205ENST00000485746 SMC2O95347 1197 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 TYMPP19971 482 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 WNT7BP56706 349 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 FAM160A1Q05DH4 1040 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 DPYDQ12882 1025 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 MRPL58Q14197 206 aaKnown RBP13.5□□□□□ -0.25
PTCD1-205ENST00000485746 TPGS2Q68CL5 300 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 SLC8B1Q6J4K2 584 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 RTL10Q7L3V2 364 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 GRASPQ7Z6J2 395 aaPredicted RBP13.5□□□□□ -0.25
PTCD1-205ENST00000485746 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 KIAA0895Q8NCT3 520 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 CCDC127Q96BQ5 260 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 WDR6Q9NNW5 1121 aaKnown RBP13.5□□□□□ -0.25
PTCD1-205ENST00000485746 RMND1Q9NWS8 449 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 ITGA11Q9UKX5 1188 aa13.5□□□□□ -0.25
PTCD1-205ENST00000485746 CLUHO75153 1309 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 WDR27A2RRH5 827 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 KPNA7A9QM74 516 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 SPTLC1O15269 473 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 TBC1D4O60343 1298 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 PHACTR2O75167 634 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 RHOBTB3O94955 611 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 FSHRP23945 695 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 AARSP49588 968 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTCD1-205ENST00000485746 ADCY1Q08828 1119 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 MYO1EQ12965 1108 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 PNOCQ13519 176 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 KCNB1Q14721 858 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 GET4Q7L5D6 327 aaPredicted RBP13.49□□□□□ -0.25
PTCD1-205ENST00000485746 WDR49Q8IV35 697 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 FMR1NBQ8N0W7 255 aaPredicted RBP13.49□□□□□ -0.25
PTCD1-205ENST00000485746 C1orf127Q8N9H9 656 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 FEZF2Q8TBJ5 459 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 KHSRPQ92945 711 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTCD1-205ENST00000485746 ZNF707Q96C28 371 aaPredicted RBP13.49□□□□□ -0.25
PTCD1-205ENST00000485746 INTS13Q9NVM9 706 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 LIMD1Q9UGP4 676 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 MAPK8IP1Q9UQF2 711 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 USTQ9Y2C2 406 aa13.49□□□□□ -0.25
PTCD1-205ENST00000485746 PDXKO00764 312 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms