RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 THP07101 528 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 GJA1P17302 382 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 ATP2B1P20020 1258 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 ANAPC15P60006 121 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 ANKS3Q6ZW76 656 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 HS6ST3Q8IZP7 471 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 ELMOD1Q8N336 334 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 DEFB124Q8NES8 71 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 NFKBIZQ9BYH8 718 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 DUSP15Q9H1R2 295 aaPredicted RBP13.4□□□□□ -0.26
SSR4-210ENST00000485612 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 KLK13Q9UKR3 277 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 LOC400499M0QZD8 3231 aa13.4□□□□□ -0.26
SSR4-210ENST00000485612 A0A1B0GUA9 196 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 BCLAF3A2AJT9 711 aaKnown RBP13.39□□□□□ -0.27
SSR4-210ENST00000485612 EIF4E1BA6NMX2 242 aaKnown RBP13.39□□□□□ -0.27
SSR4-210ENST00000485612 PTGESO14684 152 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 ABLIM3O94929 683 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 MYL4P12829 197 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 IGFBP6P24592 240 aaPredicted RBP13.39□□□□□ -0.27
SSR4-210ENST00000485612 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
SSR4-210ENST00000485612 ROR1Q01973 937 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 ANKRD1Q15327 319 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 ELF2Q15723 593 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 IQCEQ6IPM2 695 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 PROSER1Q86XN7 944 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 TCEAL8Q8IYN2 117 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 RSPRY1Q96DX4 576 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 ZNF512Q96ME7 567 aaPredicted RBP13.39□□□□□ -0.27
SSR4-210ENST00000485612 GPR88Q9GZN0 384 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 PDZD7Q9H5P4 517 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 SNTG2Q9NY99 539 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
SSR4-210ENST00000485612 LAMA5O15230 3695 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 AKAP13Q12802 2813 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 ADAMTS20P59510 1910 aa13.39□□□□□ -0.27
SSR4-210ENST00000485612 GCN1Q92616 2671 aaKnown RBP13.38□□□□□ -0.27
SSR4-210ENST00000485612 CDX4O14627 284 aaPredicted RBP13.38□□□□□ -0.27
SSR4-210ENST00000485612 KHNYNO15037 678 aaKnown RBP13.38□□□□□ -0.27
SSR4-210ENST00000485612 ATG13O75143 517 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 SEC24AO95486 1093 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 ATF2P15336 505 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 MCM7P33993 719 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 ARPP19P56211 112 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 FCHO2Q0JRZ9 810 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 TEAD2Q15562 447 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 NAB2Q15742 525 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 COL28A1Q2UY09 1125 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 UAP1L1Q3KQV9 507 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 EEF1DP3Q658K8 133 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 CDCA2Q69YH5 1023 aaPredicted RBP13.38□□□□□ -0.27
SSR4-210ENST00000485612 SLC8B1Q6J4K2 584 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 CATSPER3Q86XQ3 398 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 CAMKK1Q8N5S9 505 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 DDX27Q96GQ7 796 aaKnown RBP13.38□□□□□ -0.27
SSR4-210ENST00000485612 FZD8Q9H461 694 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 SLITRK6Q9H5Y7 841 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 GTSE1Q9NYZ3 720 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 INSL5Q9Y5Q6 135 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 TCHHQ07283 1943 aa13.38□□□□□ -0.27
SSR4-210ENST00000485612 DCLK1O15075 740 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 TRAPPC3O43617 180 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 RECQL4O94761 1208 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 B3GAT3O94766 335 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 LIG1P18858 919 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 HAUS6Q7Z4H7 955 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 GPIHBP1Q8IV16 184 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 NOSTRINQ8IVI9 506 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 KIFC3Q9BVG8 833 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 CCDC113Q9H0I3 377 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 SLC32A1Q9H598 525 aa13.37□□□□□ -0.27
SSR4-210ENST00000485612 PRMT7Q9NVM4 692 aaPredicted RBP13.37□□□□□ -0.27
SSR4-210ENST00000485612 TMEM189-UBE2V1I3L0A0 370 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 I3L4J1 428 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 SEC24BO95487 1268 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 CAPNS1P04632 268 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 PRKCBP05771 671 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
SSR4-210ENST00000485612 CLCNKBP51801 687 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 NEK4P51957 841 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 TRIM29Q14134 588 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 ECM1Q16610 540 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 FAM187BQ17R55 369 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 ZBTB8OSQ8IWT0 167 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 MCPH1Q8NEM0 835 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 PRIMPOLQ96LW4 560 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 TUFT1Q9NNX1 390 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 CEP72Q9P209 647 aa13.36□□□□□ -0.27
SSR4-210ENST00000485612 ZNF638Q14966 1978 aaKnown RBP13.36□□□□□ -0.27
SSR4-210ENST00000485612 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 N4BP3O15049 544 aa13.35□□□□□ -0.27
SSR4-210ENST00000485612 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms