RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 WDR27A2RRH5 827 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 MEIS3P2A8K0S8 358 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 HEPACAM2A8MVW5 462 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 B4E1Z4 1266 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 TNFRSF10BO14763 440 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 SH3BP5O60239 455 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 PPP1R11O60927 126 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ZNF623O75123 536 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 RNF40O75150 1001 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ALDH1A2O94788 518 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 LETM1O95202 739 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 UQCRHP07919 91 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 FGRP09769 529 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ITGA4P13612 1032 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 FCARP24071 287 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ADSSP30520 456 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 HOXD12P35452 270 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 EIF2S3P41091 472 aaKnown RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 VIPR2P41587 438 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 HAND2P61296 217 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ELAVL2Q12926 359 aaKnown RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 DUOXA1Q1HG43 343 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 SLC5A9Q2M3M2 681 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 C6orf118Q5T5N4 469 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 IFIT1BQ5T764 474 aaKnown RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 LYSMD4Q5XG99 296 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 MCTP1Q6DN14 999 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ZNF746Q6NUN9 644 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 CAVIN1Q6NZI2 390 aaKnown RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 SLC23A3Q6PIS1 610 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 USP17L6PQ6QN14 398 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 CASC1Q6TDU7 716 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 TMPRSS7Q7RTY8 843 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 COLGALT2Q8IYK4 626 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 RNF168Q8IYW5 571 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ZNF513Q8N8E2 541 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 GPT2Q8TD30 523 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 SETD7Q8WTS6 366 aaKnown RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 SYAP1Q96A49 352 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 PIGSQ96S52 555 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 GTPBP4Q9BZE4 634 aaKnown RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 TPSD1Q9BZJ3 242 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ANO2Q9NQ90 1003 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 AVENQ9NQS1 362 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 SPTLC3Q9NUV7 552 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 DNAAF2Q9NVR5 837 aaKnown RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 EBF1Q9UH73 591 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 MBD1Q9UIS9 605 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 R3HCC1Q9Y3T6 440 aaKnown RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 AK5Q9Y6K8 562 aa7.02□□□□□ -1.29
CAPN13-206ENST00000485248 MUC22E2RYF6 1773 aaPredicted RBP7.02□□□□□ -1.29
CAPN13-206ENST00000485248 ATXN2Q99700 1313 aaKnown RBP7.01□□□□□ -1.29
CAPN13-206ENST00000485248 DOCK6Q96HP0 2047 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 ASCC3Q8N3C0 2202 aaKnown RBP7.01□□□□□ -1.29
CAPN13-206ENST00000485248 SPTA1P02549 2419 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 GOLGA8CPA6NN73 597 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 B4GALT3O60512 393 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 ICMTO60725 284 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 CSDE1O75534 798 aaKnown RBP7.01□□□□□ -1.29
CAPN13-206ENST00000485248 MICAL2O94851 1124 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 KIF20AO95235 890 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 TPM3P06753 285 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 ITGB5P18084 799 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 MAPK1P28482 360 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 HOXC13P31276 330 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 MLH1P40692 756 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 SPIRE1Q08AE8 756 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 NCBP1Q09161 790 aaKnown RBP7.01□□□□□ -1.29
CAPN13-206ENST00000485248 BYSLQ13895 437 aaKnown RBP7.01□□□□□ -1.29
CAPN13-206ENST00000485248 GRM4Q14833 912 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 MAP7D1Q3KQU3 841 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 FBXO43Q4G163 708 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 FAM171A1Q5VUB5 890 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 SWSAP1Q6NVH7 229 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 TXNDC11Q6PKC3 985 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 RNF19BQ6ZMZ0 732 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 TAS1R3Q7RTX0 852 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 LEMD2Q8NC56 503 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 PIBF1Q8WXW3 757 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 ZNF592Q92610 1267 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 CAMK1GQ96NX5 476 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 PNMA5Q96PV4 448 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 ZSCAN10Q96SZ4 725 aaPredicted RBP7.01□□□□□ -1.29
CAPN13-206ENST00000485248 TRIM6Q9C030 488 aaPredicted RBP7.01□□□□□ -1.29
CAPN13-206ENST00000485248 TRIM4Q9C037 500 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 ASAH2Q9NR71 780 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 KCNH7Q9NS40 1196 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 THG1LQ9NWX6 298 aaKnown RBP7.01□□□□□ -1.29
CAPN13-206ENST00000485248 GTSE1Q9NYZ3 720 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 TMEM63CQ9P1W3 806 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 SAMM50Q9Y512 469 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 UBIAD1Q9Y5Z9 338 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 VWA8A3KMH1 1905 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 PLXNB3Q9ULL4 1909 aa7.01□□□□□ -1.29
CAPN13-206ENST00000485248 PRPF40AO75400 957 aaKnown RBP7□□□□□ -1.29
CAPN13-206ENST00000485248 SERPINF2P08697 491 aa7□□□□□ -1.29
CAPN13-206ENST00000485248 MYL4P12829 197 aa7□□□□□ -1.29
CAPN13-206ENST00000485248 OR1D2P34982 312 aa7□□□□□ -1.29
CAPN13-206ENST00000485248 HNF1BP35680 557 aa7□□□□□ -1.29
CAPN13-206ENST00000485248 ATP1A2P50993 1020 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms