RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 PNMA5Q96PV4 448 aa11.14□□□□□ -0.63
EXOSC1-210ENST00000485122 E9PAM4 449 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 DRD1P21728 446 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 DPP6P42658 865 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 MCM2P49736 904 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 SEC13P55735 322 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 GRIK2Q13002 908 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 RUNX3Q13761 415 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 TARBP2Q15633 366 aaKnown RBP11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 MAP7D1Q3KQU3 841 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 PLEKHG6Q3KR16 790 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 ELMOD1Q8N336 334 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 CCDC33Q8N5R6 958 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 CNNM3Q8NE01 707 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 ZNF461Q8TAF7 563 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 ZNF512Q96ME7 567 aaPredicted RBP11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 CEP89Q96ST8 783 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 P2RY13Q9BPV8 354 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 PI4K2AQ9BTU6 479 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 CXCL16Q9H2A7 254 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 GKN1Q9NS71 199 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 MAN2B2Q9Y2E5 1009 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 BTBD3Q9Y2F9 522 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 GIT1Q9Y2X7 761 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 SAMM50Q9Y512 469 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 CABIN1Q9Y6J0 2220 aa11.13□□□□□ -0.63
EXOSC1-210ENST00000485122 KNTC1P50748 2209 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 IGKV6-21A0A0C4DH24 114 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 FAM86B1E9PN63 330 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 IPO5O00410 1097 aaKnown RBP11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 ZNF213O14771 459 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 ABLIM3O94929 683 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 FAM86B2P0C5J1 330 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 RPL6Q02878 288 aaKnown RBP11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 TUSC3Q13454 348 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 FBXO43Q4G163 708 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 KIAA1614Q5VZ46 1190 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 CDR2LQ86X02 465 aaPredicted RBP11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 PLA2G4DQ86XP0 818 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 TCEAL8Q8IYN2 117 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 RRP36Q96EU6 259 aaKnown RBP11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 SLC4A5Q9BY07 1137 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 LRRC3Q9BY71 257 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 GPR88Q9GZN0 384 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 HELLSQ9NRZ9 838 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 PCDHA10Q9Y5I2 948 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 BACE2Q9Y5Z0 518 aa11.12□□□□□ -0.63
EXOSC1-210ENST00000485122 BLACEA4D250 179 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 TSPAN1O60635 241 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 ATF2P15336 505 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 TMPRSS3P57727 454 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 ZNF33AQ06730 810 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 ELAVL2Q12926 359 aaKnown RBP11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 PTPAQ15257 358 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 CRY1Q16526 586 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 C6orf118Q5T5N4 469 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 ERICH1Q86X53 443 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 SLC41A1Q8IVJ1 513 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 USP33Q8TEY7 942 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 FGF11Q92914 225 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 LIN37Q96GY3 246 aaPredicted RBP11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 TMEM176AQ96HP8 235 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 LGMNQ99538 433 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 FAM83CQ9BQN1 747 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 NRBP2Q9NSY0 501 aa11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 FNDC3AQ9Y2H6 1198 aaKnown RBP11.11□□□□□ -0.63
EXOSC1-210ENST00000485122 TMEM131Q92545 1883 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 ZNF638Q14966 1978 aaKnown RBP11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 ICE1Q9Y2F5 2266 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 IGLV3-22A0A075B6J6 115 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 BRINP1O60477 761 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 DNM2P50570 870 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 CDC42EP1Q00587 391 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 MCMDC2Q4G0Z9 681 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 GPR158Q5T848 1215 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 LMBRD2Q68DH5 695 aaPredicted RBP11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 SLC8B1Q6J4K2 584 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 ATG14Q6ZNE5 492 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 SMAP1Q8IYB5 467 aaPredicted RBP11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 LEMD2Q8NC56 503 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 RIN3Q8TB24 985 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 RHBDD1Q8TEB9 315 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 WHAMMQ8TF30 809 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 LPIN3Q9BQK8 851 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 CSRNP2Q9H175 543 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 OBP2AQ9NY56 170 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 PARP2Q9UGN5 583 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 SEC63Q9UGP8 760 aaKnown RBP11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 MMP17Q9ULZ9 603 aa11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.1□□□□□ -0.63
EXOSC1-210ENST00000485122 COL4A3BPQ9Y5P4 624 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms