RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 C1orf54Q8WWF1 131 aa9.16□□□□□ -0.94
TMEM248-206ENST00000484751 CPA5Q8WXQ8 436 aa9.16□□□□□ -0.94
TMEM248-206ENST00000484751 ARHGEF2Q92974 986 aaKnown RBP9.16□□□□□ -0.94
TMEM248-206ENST00000484751 BTBD6Q96KE9 485 aa9.16□□□□□ -0.94
TMEM248-206ENST00000484751 SH2D3AQ9BRG2 576 aa9.16□□□□□ -0.94
TMEM248-206ENST00000484751 MIS12Q9H081 205 aa9.16□□□□□ -0.94
TMEM248-206ENST00000484751 CDC42EP4Q9H3Q1 356 aaKnown RBP9.16□□□□□ -0.94
TMEM248-206ENST00000484751 A1CFQ9NQ94 594 aaKnown RBP9.16□□□□□ -0.94
TMEM248-206ENST00000484751 LGALS13Q9UHV8 139 aa9.16□□□□□ -0.94
TMEM248-206ENST00000484751 DRG1Q9Y295 367 aaKnown RBP9.16□□□□□ -0.94
TMEM248-206ENST00000484751 SSC5DA1L4H1 1573 aa9.16□□□□□ -0.94
TMEM248-206ENST00000484751 ADGRA3Q8IWK6 1321 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 CHUKO15111 745 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 TLR3O15455 904 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 ADCY3O60266 1144 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 TOM1L1O75674 476 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 TNNC2P02585 160 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 RALAP11233 206 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 ACO1P21399 889 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 GLRA2P23416 452 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 HNRNPH1P31943 449 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 SLC8A1P32418 973 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 KCNJ1P48048 391 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 GMPSP49915 693 aaPredicted RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 MNAT1P51948 309 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 HMGCS2P54868 508 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 NLRP11P59045 1033 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 IL9RQ01113 521 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 EN1Q05925 392 aaPredicted RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 KLF1Q13351 362 aaPredicted RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 MAMLD1Q13495 774 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 SNX1Q13596 522 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 TMEM132BQ14DG7 1078 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 CNGA2Q16280 664 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 KYAT1Q16773 422 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 HADHQ16836 314 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 DUOXA2Q1HG44 320 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 ZNF568Q3ZCX4 644 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 TBC1D10BQ4KMP7 808 aaPredicted RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 SH3D19Q5HYK7 790 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 IZUMO3Q5VZ72 239 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 DCUN1D2Q6PH85 259 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 TAS1R3Q7RTX0 852 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 PIGWQ7Z7B1 504 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 ZCCHC9Q8N567 271 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 TTC39CQ8N584 583 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 MAGEC3Q8TD91 643 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 EPS8L3Q8TE67 593 aaKnown RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 SGSM3Q96HU1 749 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 ZNF317Q96PQ6 595 aaPredicted RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 C11orf70Q9BRQ4 267 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 PI4K2AQ9BTU6 479 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 FAM124BQ9H5Z6 455 aaPredicted RBP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.15□□□□□ -0.94
TMEM248-206ENST00000484751 WDR35Q9P2L0 1181 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 ANKFY1Q9P2R3 1169 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 BCS1LQ9Y276 419 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 EFR3BQ9Y2G0 817 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 RIPK3Q9Y572 518 aa9.15□□□□□ -0.94
TMEM248-206ENST00000484751 COL4A5P29400 1685 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 UMODL1Q5DID0 1318 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 IGKV6D-21A0A0A0MT36 114 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 TCRBV7S2A1N4TA0A589 114 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 DCDC2CA8MYV0 355 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 OGTO15294 1046 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 MAFO75444 373 aaPredicted RBP9.14□□□□□ -0.95
TMEM248-206ENST00000484751 IL18RAPO95256 599 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 ACSL3O95573 720 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 KRT1P04264 644 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 KRT7P08729 469 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 TSHRP16473 764 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 DESP17661 470 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 MMP8P22894 467 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 EIF4BP23588 611 aaKnown RBP9.14□□□□□ -0.95
TMEM248-206ENST00000484751 GBP2P32456 591 aaPredicted RBP9.14□□□□□ -0.95
TMEM248-206ENST00000484751 STX2P32856 288 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 PHBP35232 272 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 SCTRP47872 440 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 ACOT2P49753 483 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 SLC26A2P50443 739 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 ZNF132P52740 706 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 SLC18A1P54219 525 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 SP4Q02446 784 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 MORF4L2Q15014 288 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 RASA2Q15283 850 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 SNCBQ16143 134 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 MAPK6Q16659 721 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 NBPF12Q5TAG4 269 aaPredicted RBP9.14□□□□□ -0.95
TMEM248-206ENST00000484751 CENPUQ71F23 418 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 POLNQ7Z5Q5 900 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 CCDC91Q7Z6B0 441 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 RPAINQ86UA6 219 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 TDRPQ86YL5 185 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 ZDHHC14Q8IZN3 488 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 NIPA2Q8N8Q9 360 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 MDM1Q8TC05 714 aa9.14□□□□□ -0.95
TMEM248-206ENST00000484751 ASAP3Q8TDY4 903 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms