RNA–Protein interactions for RNA: ENST00000484594.5

ERBB4-209, Transcript of erb-b2 receptor tyrosine kinase 4, human

TSL 1 (best)

Gene ERBB4, Length 2,680 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB4-209	ENST00000484594	SGPL1	O95470	568 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	HSPA8	P11142	646 aa	Known RBP	11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	TNFAIP3	P21580	790 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	CTCF	P49711	727 aa	Predicted RBP	11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	LPIN1	Q14693	890 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	TWF2	Q6IBS0	349 aa	Known RBP	11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	ALKBH5	Q6P6C2	394 aa	Known RBP	11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	LIMS2	Q7Z4I7	341 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	UNC93A	Q86WB7	457 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	SMG8	Q8ND04	991 aa	Known RBP	11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	KIF12	Q96FN5	646 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	ALS2CR12	Q96Q35	445 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	RGS18	Q9NS28	235 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	SIX4	Q9UIU6	781 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	ANKRD62	A6NC57	917 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	MED7	O43513	233 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	MTA2	O94776	668 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	NFIC	P08651	508 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	ITGA4	P13612	1032 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	CYP11B1	P15538	503 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	FAM189B	P81408	668 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	RHOT2	Q8IXI1	618 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	DDX27	Q96GQ7	796 aa	Known RBP	11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	APOBEC3G	Q9HC16	384 aa	Known RBP	11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	SNTG2	Q9NY99	539 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	PADI3	Q9ULW8	664 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	NUB1	Q9Y5A7	615 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	TSC2	P49815	1807 aa		11.65	□□□□□ -0.54
ERBB4-209	ENST00000484594	USP27X	A6NNY8	438 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	PIR	O00625	290 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	MEFV	O15553	781 aa	Predicted RBP	11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	TACC1	O75410	805 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	H2AFZ	P0C0S5	128 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	PRLR	P16471	622 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	CDH5	P33151	784 aa	Predicted RBP	11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	ASPA	P45381	313 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	HTRA3	P83110	453 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	TMEM62	Q0P6H9	643 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	ARHGAP44	Q17R89	818 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	SV2C	Q496J9	727 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	CCDC122	Q5T0U0	273 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	GJB7	Q6PEY0	223 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	H2AFV	Q71UI9	128 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	ACRBP	Q8NEB7	543 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	OLIG1	Q8TAK6	271 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	DDX1	Q92499	740 aa	Known RBP	11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	PPP1R10	Q96QC0	940 aa	Known RBP	11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	EIF2A	Q9BY44	585 aa	Known RBP	11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594		A0A087X0T9	212 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	ERICH4	A6NGS2	130 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	ZNF263	O14978	683 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	FAM228B	P0C875	321 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	GSC	P56915	257 aa	Predicted RBP	11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	CHMP4BP1	P59074	171 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	MYL6	P60660	151 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	LRRC8D	Q7L1W4	858 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	TATDN2	Q93075	761 aa		11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	AVEN	Q9NQS1	362 aa	Predicted RBP	11.64	□□□□□ -0.55
ERBB4-209	ENST00000484594	DDX3X	O00571	662 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	CES2	O00748	559 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	HOXA2	O43364	376 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	PLEK	P08567	350 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	GJA8	P48165	433 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	GRIK3	Q13003	919 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	ZNF618	Q5T7W0	954 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	ICE2	Q659A1	982 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	TMEM192	Q8IY95	271 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	SYCE1	Q8N0S2	351 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	TOP6BL	Q8N6T0	577 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	SH3TC2	Q8TF17	1288 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	WNT8B	Q93098	351 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	HPDL	Q96IR7	371 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	NOX5	Q96PH1	765 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	DESI2	Q9BSY9	194 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	MIS12	Q9H081	205 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	RNF208	Q9H0X6	261 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	LHX5	Q9H2C1	402 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	NXF3	Q9H4D5	531 aa	Known RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	KANSL3	Q9P2N6	904 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	ADAMTS1	Q9UHI8	967 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	SMIM28	A0A1B0GU29	152 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	CST3	P01034	146 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	CXCL10	P02778	98 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	CYP1A1	P04798	512 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	ITGB3	P05106	788 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	TNNC1	P63316	161 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	APBA1	Q02410	837 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	FAM212A	Q96EL1	285 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	ZNF668	Q96K58	619 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	C16orf45	Q96MC5	204 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	TRMT13	Q9NUP7	481 aa	Known RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	TRMT1	Q9NXH9	659 aa	Known RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	GINS2	Q9Y248	185 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	PCDHGC5	Q9Y5F6	944 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	MICAL3	Q7RTP6	2002 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	CENPC	Q03188	943 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	GFPT1	Q06210	699 aa	Predicted RBP	11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	SEZ6	Q53EL9	994 aa		11.63	□□□□□ -0.55
ERBB4-209	ENST00000484594	C9orf57	Q5W0N0	161 aa		11.63	□□□□□ -0.55

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