RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 C12orf50Q8NA57 414 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-221ENST00000484566 LNX1Q8TBB1 728 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-221ENST00000484566 FAM3CQ92520 227 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 IRF7Q92985 503 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 ELSPBP1Q96BH3 223 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 MCRS1Q96EZ8 462 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 BBC3Q96PG8 261 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-221ENST00000484566 ESYT1Q9BSJ8 1104 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 RNF26Q9BY78 433 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-221ENST00000484566 SLKQ9H2G2 1235 aaPredicted RBP9.43□□□□□ -0.9
DDX39B-221ENST00000484566 HCFC1R1Q9NWW0 138 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 VPS54Q9P1Q0 977 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 DNMT3BQ9UBC3 853 aaKnown RBP9.43□□□□□ -0.9
DDX39B-221ENST00000484566 DDX25Q9UHL0 483 aaKnown RBP9.43□□□□□ -0.9
DDX39B-221ENST00000484566 PCDHB11Q9Y5F2 797 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 SPTA1P02549 2419 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 SHROOM3Q8TF72 1996 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 TICRRQ7Z2Z1 1910 aa9.43□□□□□ -0.9
DDX39B-221ENST00000484566 PTPN13Q12923 2485 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 CASTOR2A6NHX0 329 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 KALRNO60229 2985 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 NPTXRO95502 500 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 LRG1P02750 347 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 P4HBP07237 508 aaKnown RBP9.42□□□□□ -0.9
DDX39B-221ENST00000484566 RHOP08100 348 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 HMGB1P09429 215 aaKnown RBP9.42□□□□□ -0.9
DDX39B-221ENST00000484566 ARF4P18085 180 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-221ENST00000484566 YWHABP31946 246 aaKnown RBP9.42□□□□□ -0.9
DDX39B-221ENST00000484566 PTENP60484 403 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 FZD5Q13467 585 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 LRRC32Q14392 662 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 GRM2Q14416 872 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 XKR9Q5GH70 373 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 MOXD1Q6UVY6 613 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-221ENST00000484566 CEP68Q76N32 757 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 GSTCDQ8NEC7 633 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 ETNPPLQ8TBG4 499 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 LXNQ9BS40 222 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 TRMT61BQ9BVS5 477 aaKnown RBP9.42□□□□□ -0.9
DDX39B-221ENST00000484566 SLC26A6Q9BXS9 759 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 LMAN1LQ9HAT1 526 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 ZFP14Q9HCL3 533 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 CYLDQ9NQC7 956 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 CACNG4Q9UBN1 327 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 PIAS3Q9Y6X2 628 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
DDX39B-221ENST00000484566 NID2Q14112 1375 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 CYP3A7-CYP3A51PA0A087WV96 503 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 CHURC1-FNTBB4DL54 471 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 EML1O00423 815 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 TM4SF5O14894 197 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 EDIL3O43854 480 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 CEBPBP17676 345 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 CYP3A7P24462 503 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 OR1D2P34982 312 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 FNTBP49356 437 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 LIMK1P53667 647 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 SATB1Q01826 763 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 MBTD1Q05BQ5 628 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 PPP2R5CQ13362 524 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 RAB33AQ14088 237 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 SLC5A9Q2M3M2 681 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 TANGO2Q6ICL3 276 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 C1orf228Q6PIY5 440 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 PDZD3Q86UT5 571 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 LONP2Q86WA8 852 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 C4orf19Q8IY42 314 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 DEPDC1BQ8WUY9 529 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 CCDC43Q96MW1 224 aaKnown RBP9.41□□□□□ -0.9
DDX39B-221ENST00000484566 PAAF1Q9BRP4 392 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 PLA2G2FQ9BZM2 168 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 AVENQ9NQS1 362 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-221ENST00000484566 SH3GLB2Q9NR46 395 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 MTRRQ9UBK8 725 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 PCDHA4Q9UN74 947 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 CDY1Q9Y6F8 540 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 COL4A2P08572 1712 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 TEX15Q9BXT5 2789 aa9.41□□□□□ -0.9
DDX39B-221ENST00000484566 PDCD11Q14690 1871 aaKnown RBP9.4□□□□□ -0.9
DDX39B-221ENST00000484566 SHISA7A6NL88 538 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 EIF4E1BA6NMX2 242 aaKnown RBP9.4□□□□□ -0.9
DDX39B-221ENST00000484566 ZNF197O14709 1029 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 ADAM12O43184 909 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 MARCH6O60337 910 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 THP07101 528 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 PTPN2P17706 415 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 PSMC3P17980 439 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 GDI1P31150 447 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 ELF1P32519 619 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 POU5F1BQ06416 359 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 SPIRE1Q08AE8 756 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 USP4Q13107 963 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 CAPSQ13938 189 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 HEATR6Q6AI08 1181 aaKnown RBP9.4□□□□□ -0.9
DDX39B-221ENST00000484566 PPP4R3AQ6IN85 833 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 PDZD4Q76G19 769 aaPredicted RBP9.4□□□□□ -0.9
DDX39B-221ENST00000484566 TRIM22Q8IYM9 498 aa9.4□□□□□ -0.9
DDX39B-221ENST00000484566 SPEM1Q8N4L4 309 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms