RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	CEP68	Q76N32	757 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	TMC8	Q8IU68	726 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	YAF2	Q8IY57	180 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	DIS3L2	Q8IYB7	885 aa	Known RBP	13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	ERMN	Q8TAM6	284 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	DDX12P	Q92771	950 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	ACAP3	Q96P50	834 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	OBP2A	Q9NY56	170 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	PCDHB8	Q9UN66	801 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	PHLPP2	Q6ZVD8	1323 aa		13.61	□□□□□ -0.23
PABPC4-215	ENST00000484555	CHD6	Q8TD26	2715 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	SLC38A8	A6NNN8	435 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	SPECC1L-ADORA2A	F8WAN1	911 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	ABLIM1	O14639	778 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	OAZ2	O95190	189 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	MCF2	P10911	925 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	PROZ	P22891	400 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	RAP1GAP	P47736	663 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	SOX9	P48436	509 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	HEATR6	Q6AI08	1181 aa	Known RBP	13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	TXNDC11	Q6PKC3	985 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	TBC1D32	Q96NH3	1257 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	C2orf42	Q9NWW7	574 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555	YIPF1	Q9Y548	306 aa		13.6	□□□□□ -0.23
PABPC4-215	ENST00000484555		A0A1W2PRU2	124 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555		M0QZQ0	153 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	EPN2	O95208	641 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	VNN2	O95498	520 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	CPB1	P15086	417 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	WEE1	P30291	646 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	MCM7	P33993	719 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	OSTN	P61366	133 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	PLD1	Q13393	1074 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	ORC2	Q13416	577 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	ZNF568	Q3ZCX4	644 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	AASDH	Q4L235	1098 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	ARHGAP29	Q52LW3	1261 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	PLA2G2C	Q5R387	149 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	TAS1R3	Q7RTX0	852 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	GAB3	Q8WWW8	586 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	C18orf25	Q96B23	403 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	LRRC3B	Q96PB8	259 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	MKNK1	Q9BUB5	465 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	MRPL4	Q9BYD3	311 aa	Known RBP	13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	DNAJC25	Q9H1X3	360 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	ARRDC1-AS1	Q9H2J1	176 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	SLITRK6	Q9H5Y7	841 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	POLD4	Q9HCU8	107 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	ARHGAP28	Q9P2N2	729 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	ASB3	Q9Y575	518 aa		13.59	□□□□□ -0.23
PABPC4-215	ENST00000484555	AXIN1	O15169	862 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	MEFV	O15553	781 aa	Predicted RBP	13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	AKAP3	O75969	853 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	MARCKS	P29966	332 aa	Predicted RBP	13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	MCM4	P33991	863 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	NPTX2	P47972	431 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	GPR17	Q13304	367 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	ANKRD1	Q15327	319 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	SF3A2	Q15428	464 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	ECM1	Q16610	540 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	STPG1	Q5TH74	334 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	HAUS3	Q68CZ6	603 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	MPZL3	Q6UWV2	235 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	CACNA2D4	Q7Z3S7	1137 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	HAUS6	Q7Z4H7	955 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	C12orf50	Q8NA57	414 aa	Predicted RBP	13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	TARS2	Q9BW92	718 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	LSM14B	Q9BX40	385 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	BHMT2	Q9H2M3	363 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	RXFP3	Q9NSD7	469 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	GTSE1	Q9NYZ3	720 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	RBM19	Q9Y4C8	960 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	PCDHGA5	Q9Y5G8	931 aa		13.58	□□□□□ -0.24
PABPC4-215	ENST00000484555	CIT	O14578	2027 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	LAMA1	P25391	3075 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	FGF19	O95750	216 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	PROS1	P07225	676 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	OR52Z1	P0C646	297 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	LRPAP1	P30533	357 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	HOXC13	P31276	330 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	AARS	P49588	968 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	EPHB3	P54753	998 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	PEX3	P56589	373 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	PLCB2	Q00722	1185 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	YWHAH	Q04917	246 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	TRIM29	Q14134	588 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	PON2	Q15165	354 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	SLC10A6	Q3KNW5	377 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	GAREM2	Q75VX8	874 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	NSUN7	Q8NE18	718 aa	Known RBP	13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	FAM200A	Q8TCP9	573 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	ZC3H10	Q96K80	434 aa	Known RBP	13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	CRISPLD1	Q9H336	500 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	C17orf75	Q9HAS0	396 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	HSFX1	Q9UBD0	423 aa		13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC4-215	ENST00000484555	OR6C75	A6NL08	312 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms