RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 CCP110O43303 1012 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 TLL1O43897 1013 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 GPR37L1O60883 481 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 STAU1O95793 577 aaKnown RBP15.01□□□□□ -0.01
SMAD9-204ENST00000483941 NFICP08651 508 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 KRT19P08727 400 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 SKILP12757 684 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 ACTN1P12814 892 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 FERP16591 822 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 AKAP5P24588 427 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 ANXA13P27216 316 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 FAM189BP81408 668 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 RAPGEF1Q13905 1077 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 LMBRD2Q68DH5 695 aaPredicted RBP15.01□□□□□ -0.01
SMAD9-204ENST00000483941 PDXDC1Q6P996 788 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 VPS36Q86VN1 386 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 EFCAB13Q8IY85 973 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 PPM1KQ8N3J5 372 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 HLA-CQ95604 372 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 VRTNQ9H8Y1 702 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 SIX2Q9NPC8 291 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 NLRC4Q9NPP4 1024 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 C11orf16Q9NQ32 467 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 AIPL1Q9NZN9 384 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 HES2Q9Y543 173 aa15.01□□□□□ -0.01
SMAD9-204ENST00000483941 SMIM28A0A1B0GU29 152 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 NBNO60934 754 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 IPO7O95373 1038 aaKnown RBP15□□□□□ -0.01
SMAD9-204ENST00000483941 ASS1P00966 412 aaKnown RBP15□□□□□ -0.01
SMAD9-204ENST00000483941 SERPING1P05155 500 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 THP07101 528 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 KCNJ6P48051 423 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 BPIFB4P59827 614 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 NOP14P78316 857 aaKnown RBP15□□□□□ -0.01
SMAD9-204ENST00000483941 MBTPS1Q14703 1052 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 ZBTB6Q15916 424 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 ASIC2Q16515 512 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 MEA1Q16626 185 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 ZNF699Q32M78 642 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 IQCEQ6IPM2 695 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 PHLDB3Q6NSJ2 640 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 GLB1LQ6UWU2 654 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 ECHDC2Q86YB7 292 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 CCDC170Q8IYT3 715 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 TXLNBQ8N3L3 684 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 LRRC52Q8N7C0 313 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 URGCPQ8TCY9 931 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 ARNTL2Q8WYA1 636 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 BAP1Q92560 729 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 SEMA4DQ92854 862 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 KHSRPQ92945 711 aaKnown RBP eCLIP15□□□□□ -0.01
SMAD9-204ENST00000483941 ZNF560Q96MR9 790 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 SLC9A7Q96T83 725 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 RSAD1Q9HA92 442 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 TMEM161AQ9NX61 479 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 PCDHB7Q9Y5E2 793 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 FHOD1Q9Y613 1164 aa15□□□□□ -0.01
SMAD9-204ENST00000483941 PTPRJQ12913 1337 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 LRRC53A6NM62 1247 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 C9IYK1 514 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 OFD1O75665 1012 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 VNN1O95497 513 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 ITGB3P05106 788 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 FECHP22830 423 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 RPL9P32969 192 aaKnown RBP14.99□□□□□ -0.01
SMAD9-204ENST00000483941 CYLC1P35663 651 aaPredicted RBP14.99□□□□□ -0.01
SMAD9-204ENST00000483941 SOX5P35711 763 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 WNT7BP56706 349 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 IKBKEQ14164 716 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 DRAP1Q14919 205 aaPredicted RBP14.99□□□□□ -0.01
SMAD9-204ENST00000483941 ZNF667Q5HYK9 610 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 DPY19L2P1Q6NXN4 242 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 CNKSR3Q6P9H4 555 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 DEFB128Q7Z7B8 93 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 C1orf127Q8N9H9 656 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 DBF4BQ8NFT6 615 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 DDX27Q96GQ7 796 aaKnown RBP14.99□□□□□ -0.01
SMAD9-204ENST00000483941 NIF3L1Q9GZT8 377 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 CYP3A43Q9HB55 503 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 LUC7LQ9NQ29 371 aaKnown RBP14.99□□□□□ -0.01
SMAD9-204ENST00000483941 LRFN2Q9ULH4 789 aa14.99□□□□□ -0.01
SMAD9-204ENST00000483941 SSU72P8A0A1W2PR75 194 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 ARHGEF37A1IGU5 675 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 ARL5CA6NH57 179 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 F8VZ95 297 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 ENPP3O14638 875 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 EPHB6O15197 1021 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 INPPL1O15357 1258 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 MGEA5O60502 916 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 GFPT2O94808 682 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 MSNP26038 577 aaKnown RBP14.98□□□□□ -0.01
SMAD9-204ENST00000483941 JAM2P57087 298 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 TAP1Q03518 808 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 LRMPQ12912 555 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 GRIK3Q13003 919 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 CUL2Q13617 745 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 ZNF598Q86UK7 904 aaKnown RBP14.98□□□□□ -0.01
SMAD9-204ENST00000483941 ZSCAN30Q86W11 494 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 ABI1Q8IZP0 508 aa14.98□□□□□ -0.01
SMAD9-204ENST00000483941 RNF169Q8NCN4 708 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms