RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 TARS2Q9BW92 718 aaKnown RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 IRX2Q9BZI1 471 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 GPR88Q9GZN0 384 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 HIPK3Q9H422 1215 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 FAM124BQ9H5Z6 455 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 UBE2TQ9NPD8 197 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 PRMT7Q9NVM4 692 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-206ENST00000483876 RNF14Q9UBS8 474 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 NAGPAQ9UK23 515 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 PCDHGC5Q9Y5F6 944 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 MRFAP1Q9Y605 127 aa5.83□□□□□ -1.48
COL17A1-206ENST00000483876 WDR87Q6ZQQ6 2873 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 UMODL1Q5DID0 1318 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 CNTNAP2Q9UHC6 1331 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MBLAC1A4D2B0 266 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 GOLGA8IPA6NC78 632 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 RCCD1A6NED2 376 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MOXD2PA6NHM9 499 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 GOLGA8JA6NMD2 632 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 HAS3O00219 553 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ABLIM1O14639 778 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 FANCGO15287 622 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 OGTO15294 1046 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MBTPS2O43462 519 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ZEB2O60315 1214 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 FAM189A1O60320 539 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 B4GALT4O60513 344 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ABL1P00519 1130 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 RPLP2P05387 115 aaKnown RBP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 PRKCBP05771 671 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MMP3P08254 477 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 H2AFZP0C0S5 128 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 SRGAP2CP0DJJ0 459 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MCF2P10911 925 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 TNFAIP3P21580 790 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 PHKA2P46019 1235 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 CPT1AP50416 773 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 HADHBP55084 474 aaKnown RBP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 AMPD2Q01433 879 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 APBA1Q02410 837 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MBTD1Q05BQ5 628 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ITIH3Q06033 890 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 DRP2Q13474 957 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 CLUL1Q15846 466 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 DUOXA2Q1HG44 320 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 KIAA0753Q2KHM9 967 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 WDR44Q5JSH3 913 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MARCH8Q5T0T0 291 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 TMEM63BQ5T3F8 832 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 PPP1R2P3Q6NXS1 205 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MPZL3Q6UWV2 235 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 H2AFVQ71UI9 128 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 TRAPPC11Q7Z392 1133 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 APBB1IPQ7Z5R6 666 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF677Q86XU0 584 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 NT5DC4Q86YG4 428 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 RHPN2Q8IUC4 686 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 WDR49Q8IV35 697 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 HERC6Q8IVU3 1022 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 BRSK2Q8IWQ3 736 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 CD302Q8IX05 232 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 FAM126BQ8IXS8 530 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 KIAA0319LQ8IZA0 1049 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 SLC35F6Q8N357 371 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 DCLK2Q8N568 766 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ZSWIM2Q8NEG5 633 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 MNS1Q8NEH6 495 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 OR6J1Q8NGC5 347 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 HELQQ8TDG4 1101 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ANKRD7Q92527 254 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF516Q92618 1163 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 RUBCNQ92622 972 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 SAAL1Q96ER3 474 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 GLT1D1Q96MS3 346 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 NT5C1BQ96P26 610 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 TSPAN18Q96SJ8 248 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 CGRRF1Q99675 332 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 AGPAT1Q99943 283 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 TCHPQ9BT92 498 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 INO80BQ9C086 356 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ISCUQ9H1K1 167 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ASB7Q9H672 318 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 IFT122Q9HBG6 1241 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 CLDND1Q9NY35 253 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 RBAKQ9NYW8 714 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 CPSF3Q9UKF6 684 aaKnown RBP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ANGPTL2Q9UKU9 493 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 CNTN6Q9UQ52 1028 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 SAR1BQ9Y6B6 198 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 DUSP10Q9Y6W6 482 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ARID2Q68CP9 1835 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 ZFYVE26Q68DK2 2539 aa5.82□□□□□ -1.48
COL17A1-206ENST00000483876 COL4A4P53420 1690 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-206ENST00000483876 VPS13AQ96RL7 3174 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 A0A0U1RQJ8 604 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 A0A1B0GUA9 196 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 SMIM35A0A1B0GVV1 85 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 LCHNA4D1U4 455 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms