RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 PANX2Q96RD6 677 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 CDCA3Q99618 268 aaPredicted RBP12.27□□□□□ -0.45
PTPN18-212ENST00000483617 CRACR2AQ9BSW2 395 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 NAA15Q9BXJ9 866 aaKnown RBP12.27□□□□□ -0.45
PTPN18-212ENST00000483617 CDT1Q9H211 546 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 PDZD7Q9H5P4 517 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 TMEM8AQ9HCN3 771 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 PTPRHQ9HD43 1115 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 ENTPD7Q9NQZ7 604 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 SPG21Q9NZD8 308 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 BARX2Q9UMQ3 279 aaPredicted RBP12.27□□□□□ -0.45
PTPN18-212ENST00000483617 CAPN11Q9UMQ6 739 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 SIK3Q9Y2K2 1263 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 USP20Q9Y2K6 914 aa12.27□□□□□ -0.45
PTPN18-212ENST00000483617 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 PER2O15055 1255 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 PMM2O15305 246 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 MFAP3LO75121 409 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 ZNF623O75123 536 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 CLSTN1O94985 981 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 TNNC2P02585 160 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 CASP14P31944 242 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 KRT9P35527 623 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 GCLMP48507 274 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 KRT17Q04695 432 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 BIRC3Q13489 604 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 AMHR2Q16671 573 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 GLB1LQ6UWU2 654 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 LRRC8AQ8IWT6 810 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 VN1R2Q8NFZ6 395 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 OR8K1Q8NGG5 319 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 ANKRD36BP1Q96IX9 119 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 ACAP3Q96P50 834 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 POP1Q99575 1024 aaKnown RBP12.26□□□□□ -0.45
PTPN18-212ENST00000483617 CGRRF1Q99675 332 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 IMPG2Q9BZV3 1241 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 NGRNQ9NPE2 291 aaKnown RBP12.26□□□□□ -0.45
PTPN18-212ENST00000483617 TOPORSQ9NS56 1045 aaPredicted RBP12.26□□□□□ -0.45
PTPN18-212ENST00000483617 CEP72Q9P209 647 aa12.26□□□□□ -0.45
PTPN18-212ENST00000483617 TTC26A0AVF1 554 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 LRRIQ3A6PVS8 624 aaPredicted RBP12.25□□□□□ -0.45
PTPN18-212ENST00000483617 MEIS3P2A8K0S8 358 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 ZC3H11AO75152 810 aaKnown RBP eCLIP12.25□□□□□ -0.45
PTPN18-212ENST00000483617 NPTXRO95502 500 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 GYPCP04921 128 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 EDN1P05305 212 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 TMEM191BP0C7N4 346 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 CCDC172P0C7W6 258 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 SRGAP2BP0DMP2 458 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 ALDH7A1P49419 539 aaKnown RBP12.25□□□□□ -0.45
PTPN18-212ENST00000483617 BCAR1P56945 870 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 PTPN21Q16825 1174 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 DUOXA2Q1HG44 320 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 WDR44Q5JSH3 913 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 TMEM31Q5JXX7 168 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 EEF1DP3Q658K8 133 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 WDR49Q8IV35 697 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 EHBP1Q8NDI1 1231 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 FBXL13Q8NEE6 735 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 PGBD4Q96DM1 585 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 SPAG5Q96R06 1193 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 INTS2Q9H0H0 1204 aaKnown RBP12.25□□□□□ -0.45
PTPN18-212ENST00000483617 ASB7Q9H672 318 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 C11orf16Q9NQ32 467 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 TBC1D13Q9NVG8 400 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 CPSF3Q9UKF6 684 aaKnown RBP12.25□□□□□ -0.45
PTPN18-212ENST00000483617 INPP5FQ9Y2H2 1132 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 PCDHB2Q9Y5E7 798 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 CITO14578 2027 aa12.25□□□□□ -0.45
PTPN18-212ENST00000483617 C5orf42Q9H799 3197 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 CARNS1A5YM72 827 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 FAM86C2PA6NEL3 165 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 TTLL13PA6NNM8 815 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 HIDE1A8MVS5 230 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 XPOTO43592 962 aaKnown RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 GPR37L1O60883 481 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 OFD1O75665 1012 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 SKILP12757 684 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 ALADP13716 330 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 PON1P27169 355 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 HOXA11P31270 313 aaPredicted RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 GRM5P41594 1212 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 PIK3CAP42336 1068 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 ADKP55263 362 aaKnown RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 MCCD1P59942 119 aaPredicted RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 POLR2FP61218 127 aaKnown RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 OSTNP61366 133 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 RBM10P98175 930 aaKnown RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 TRPC3Q13507 836 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 KCNC3Q14003 757 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 SMC1AQ14683 1233 aaKnown RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 NOMO2Q5JPE7 1267 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 UBXN11Q5T124 520 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 CRELD2Q6UXH1 353 aaPredicted RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 TMC7Q7Z402 723 aa12.24□□□□□ -0.45
PTPN18-212ENST00000483617 CDR2LQ86X02 465 aaPredicted RBP12.24□□□□□ -0.45
PTPN18-212ENST00000483617 NT5DC4Q86YG4 428 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms