RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 OR1D2P34982 312 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 MTHFRP42898 656 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 PNOCQ13519 176 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 MYBPC2Q14324 1141 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 RTL10Q7L3V2 364 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 GPR149Q86SP6 731 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 GLYCTKQ8IVS8 523 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 GUF1Q8N442 669 aaKnown RBP19.46■□□□□ 0.71
HDAC6-225ENST00000483506 C1orf127Q8N9H9 656 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 KREMEN2Q8NCW0 462 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 RIPOR3Q96MK2 946 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 GSDMAQ96QA5 445 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 APOL5Q9BWW9 433 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 OXCT2Q9BYC2 517 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-225ENST00000483506 CD320Q9NPF0 282 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 ITGA11Q9UKX5 1188 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 CDY1Q9Y6F8 540 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 LOC730098B7Z3J9 87 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 GADD45BO75293 160 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-225ENST00000483506 CYP11A1P05108 521 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 PNPLA4P41247 253 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 TAF6P49848 677 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 CYP2J2P51589 502 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 TFAMQ00059 246 aaKnown RBP19.45■□□□□ 0.7
HDAC6-225ENST00000483506 CYP24A1Q07973 514 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 PSMD6Q15008 389 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 NFIL3Q16649 462 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 ZNF280DQ6N043 979 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 WDR49Q8IV35 697 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 GJD3Q8N144 294 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 BORCS6Q96GS4 357 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 MFSD14AQ96MC6 490 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 ZNF560Q96MR9 790 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 INTS13Q9NVM9 706 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 RMND1Q9NWS8 449 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 HOOK1Q9UJC3 728 aaKnown RBP19.45■□□□□ 0.7
HDAC6-225ENST00000483506 FBXL5Q9UKA1 691 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 TRAF3IP3Q9Y228 551 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 PTPRJQ12913 1337 aa19.45■□□□□ 0.7
HDAC6-225ENST00000483506 ARHGEF37A1IGU5 675 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 ZMYND10O75800 440 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 ABLIM3O94929 683 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 POU2F2P09086 479 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 HOXA9P31269 272 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 ROR1Q01973 937 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 YWHAHQ04917 246 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-225ENST00000483506 COBLL1Q53SF7 1204 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 ATAT1Q5SQI0 421 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 TMC5Q6UXY8 1006 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 DSTYKQ6XUX3 929 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 CLEC17AQ6ZS10 378 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 LRRC52Q8N7C0 313 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 ZNF461Q8TAF7 563 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 FEZF2Q8TBJ5 459 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 NOC3LQ8WTT2 800 aaKnown RBP19.44■□□□□ 0.7
HDAC6-225ENST00000483506 ZNF707Q96C28 371 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-225ENST00000483506 SENP8Q96LD8 212 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 MTMR12Q9C0I1 747 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 GZF1Q9H116 711 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-225ENST00000483506 CDH22Q9UJ99 828 aa19.44■□□□□ 0.7
HDAC6-225ENST00000483506 EXOC3O60645 756 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 KINO60870 393 aaKnown RBP19.43■□□□□ 0.7
HDAC6-225ENST00000483506 PRPF40AO75400 957 aaKnown RBP19.43■□□□□ 0.7
HDAC6-225ENST00000483506 RFPL2O75678 378 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 SMC2O95347 1197 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 NR3C1P04150 777 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 ITGB3P05106 788 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 HNRNPA1P09651 372 aaKnown RBP eCLIP19.43■□□□□ 0.7
HDAC6-225ENST00000483506 SPATA31D3P0C874 917 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 ODC1P11926 461 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 POLR2BP30876 1174 aaKnown RBP19.43■□□□□ 0.7
HDAC6-225ENST00000483506 UBE2HP62256 183 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 UVSSAQ2YD98 709 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 CTXN3Q4LDR2 81 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 SPATA31D4Q6ZUB0 917 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 OR5B17Q8NGF7 314 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 ANKRD36BP1Q96IX9 119 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 CGRRF1Q99675 332 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 GTPBP4Q9BZE4 634 aaKnown RBP19.43■□□□□ 0.7
HDAC6-225ENST00000483506 POMKQ9H5K3 350 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 SIX4Q9UIU6 781 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 MAFFQ9ULX9 164 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 PCDHA5Q9Y5H7 936 aa19.43■□□□□ 0.7
HDAC6-225ENST00000483506 CCDC195A0A1B0GUA6 201 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 WDR27A2RRH5 827 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 SPDYE4A6NLX3 237 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 CALUO43852 315 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-225ENST00000483506 TMEM191BP0C7N4 346 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 DUOXA2Q1HG44 320 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 SV2CQ496J9 727 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 ZCWPW2Q504Y3 356 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 LIN9Q5TKA1 542 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 TPGS2Q68CL5 300 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 RDH13Q8NBN7 331 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 FAM84AQ96KN4 292 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 PRKD2Q9BZL6 878 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 DSEQ9UL01 958 aa19.42■□□□□ 0.7
HDAC6-225ENST00000483506 OR6C75A6NL08 312 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 KPNA7A9QM74 516 aa19.41■□□□□ 0.7
HDAC6-225ENST00000483506 MAPK13O15264 365 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms