RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 RABGGTBP53611 331 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 CCNA1P78396 465 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 IL13RA1P78552 427 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 CALD1Q05682 793 aaKnown RBP4.36□□□□□ -1.71
LRCH3-217ENST00000483442 IFRD2Q12894 506 aaPredicted RBP4.36□□□□□ -1.71
LRCH3-217ENST00000483442 SEC23AQ15436 765 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 TWISTNBQ3B726 338 aaPredicted RBP4.36□□□□□ -1.71
LRCH3-217ENST00000483442 FOXB2Q5VYV0 432 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 ZNF365Q70YC5 407 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 SPATC1Q76KD6 591 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 OSTM1Q86WC4 334 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 KLHDC4Q8TBB5 520 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 HERVK_113Q902F9 699 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 CFHR4Q92496 578 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 EDAQ92838 391 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 SUCLG2Q96I99 432 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 KIAA1683Q9H0B3 1180 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 CBLCQ9ULV8 474 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 OAZ3Q9UMX2 235 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 SRPK3Q9UPE1 567 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 RABGAP1Q9Y3P9 1069 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 MYBBP1AQ9BQG0 1328 aaKnown RBP4.36□□□□□ -1.71
LRCH3-217ENST00000483442 ATRNL1Q5VV63 1379 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 NARSO43776 548 aaKnown RBP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 CNMDO75829 334 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 PGK1P00558 417 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 FGBP02675 491 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 C1SP09871 688 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 C6orf222P0C671 652 aaPredicted RBP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 PYGMP11217 842 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 SLC5A1P13866 664 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 FGFR2P21802 821 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 COMTP21964 271 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 ADCY8P40145 1251 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 BTDP43251 543 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 JAM2P57087 298 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 RAC3P60763 192 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 PPIGQ13427 754 aaKnown RBP eCLIP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 GNL2Q13823 731 aaKnown RBP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 FHL2Q14192 279 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 PUM3Q15397 648 aaKnown RBP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 RAB30Q15771 203 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 SHROOM1Q2M3G4 852 aaPredicted RBP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 FAM47AQ5JRC9 791 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 KRT40Q6A162 431 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 MFSD5Q6N075 450 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 CCDC174Q6PII3 467 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 SLC4A10Q6U841 1118 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 LRSAM1Q6UWE0 723 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 ARHGAP36Q6ZRI8 547 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 USP51Q70EK9 711 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 PTRH1Q86Y79 214 aaKnown RBP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 DZIP1Q86YF9 867 aaKnown RBP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 TMEM199Q8N511 208 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 VGLL2Q8N8G2 317 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 SLC43A3Q8NBI5 491 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 PCDH19Q8TAB3 1148 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 KAZALD1Q96I82 304 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 CERS4Q9HA82 394 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 RIC8BQ9NVN3 520 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 GNL3LQ9NVN8 582 aaKnown RBP4.35□□□□□ -1.71
LRCH3-217ENST00000483442 BTBD7Q9P203 1132 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 ABCF2Q9UG63 623 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 COG5Q9UP83 839 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 PCDHA8Q9Y5H6 950 aa4.35□□□□□ -1.71
LRCH3-217ENST00000483442 MYH3P11055 1940 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 NCOR1O75376 2440 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 MUC6Q6W4X9 2439 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 STRNO43815 780 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 MPIG6BO95866 241 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 C4BPAP04003 597 aaKnown RBP4.34□□□□□ -1.71
LRCH3-217ENST00000483442 ASNSP08243 561 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 HOXC6P09630 235 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 NBPF7P0C2Y1 421 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-217ENST00000483442 PDE6AP16499 860 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 CR2P20023 1033 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 ADORA2AP29274 412 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 RAB33AQ14088 237 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 GRB14Q14449 540 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 TM4SF20Q53R12 229 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 HS1BP3Q53T59 392 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 FAM209AQ5JX71 171 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 FSTL4Q6MZW2 842 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 MAMDC4Q6UXC1 1216 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 CATSPERGQ6ZRH7 1159 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 OTOP2Q7RTS6 562 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 ANKRD33Q7Z3H0 272 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 RNF180Q86T96 592 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 ZNF808Q8N4W9 903 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-217ENST00000483442 ST13P5Q8NFI4 369 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-217ENST00000483442 IL17DQ8TAD2 202 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 LPIN2Q92539 896 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 ANKS1AQ92625 1134 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 OR14A2Q96R54 314 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 AMNQ9BXJ7 453 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 ZDHHC5Q9C0B5 715 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 BICC1Q9H694 974 aaKnown RBP4.34□□□□□ -1.71
LRCH3-217ENST00000483442 XPNPEP3Q9NQH7 507 aa4.34□□□□□ -1.71
LRCH3-217ENST00000483442 HECAQ9UBI9 543 aaPredicted RBP4.34□□□□□ -1.71
LRCH3-217ENST00000483442 CDC42EP3Q9UKI2 254 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms