RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 CPNE5Q9HCH3 593 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 TDP1Q9NUW8 608 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 SLC45A2Q9UMX9 530 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 MPPED1O15442 326 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 NDUFS2O75306 463 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 PROP1O75360 226 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 SUN1O94901 812 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 MT-CO1P00395 513 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 CHRM2P08172 466 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 MTHFD1P11586 935 aaKnown RBP4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 C5AR1P21730 350 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 ABCG1P45844 678 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 ZNF280AP59817 542 aaPredicted RBP4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 KRTAP10-11P60412 298 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 RPS7P62081 194 aaKnown RBP4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 CDC42EP1Q00587 391 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 MC2RQ01718 297 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 IL10RAQ13651 578 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 PAPD7Q5XG87 772 aaKnown RBP4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 MIGA2Q7L4E1 593 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 TOR1AIP2Q8NFQ8 470 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 FBXO41Q8TF61 875 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 LRIG1Q96JA1 1093 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 IMPG2Q9BZV3 1241 aa4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 SAP30BPQ9UHR5 308 aaKnown RBP4.2□□□□□ -1.74
LAPTM4A-202ENST00000483117 COL3A1P02461 1466 aaPredicted RBP4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 CGB1A6NKQ9 187 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 ADM5C9JUS6 153 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 PROM1O43490 865 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 IGSF3O75054 1194 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 CLSTN1O94985 981 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 CD1AP06126 327 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 PPP3CBP16298 524 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 GRIA3P42263 894 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 ZNF844Q08AG5 666 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 DYRK1AQ13627 763 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 ACAP2Q15057 778 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 INAVAQ3KP66 663 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 PREPLQ4J6C6 727 aaPredicted RBP4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 TSTD2Q5T7W7 516 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 GRASPQ7Z6J2 395 aaPredicted RBP4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 DDX42Q86XP3 938 aaKnown RBP eCLIP4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 ADGRG5Q8IZF4 528 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 CBARPQ8N350 705 aaPredicted RBP4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 SLC17A8Q8NDX2 589 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 C1orf162Q8NEQ5 155 aaPredicted RBP4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 TMIEQ8NEW7 156 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 IL17RDQ8NFM7 739 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 MYCBPAPQ8TBZ2 947 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 PACSIN1Q9BY11 444 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 SLC5A4Q9NY91 659 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 JKAMPQ9P055 326 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 RNF7Q9UBF6 113 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 LIMCH1Q9UPQ0 1083 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 IPPQ9Y573 584 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 ENTPD2Q9Y5L3 495 aa4.19□□□□□ -1.74
LAPTM4A-202ENST00000483117 DNAJC9-AS1A6NH13 148 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 TOR1BO14657 336 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 HTRA2O43464 458 aaPredicted RBP4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 ORC4O43929 436 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 SLC43A1O75387 559 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 GPD1P21695 349 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 EDNRBP24530 442 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 HNRNPMP52272 730 aaKnown RBP eCLIP4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 SRSF4Q08170 494 aaKnown RBP4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 TXNRD1Q16881 649 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 C3orf36Q3SXR2 165 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 ZNF365Q70YC5 407 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 CFAP52Q8N1V2 620 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 PDPRQ8NCN5 879 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 SSH1Q8WYL5 1049 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 KAT5Q92993 513 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 HDAC10Q969S8 669 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 MRGPRX4Q96LA9 322 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 TIMP4Q99727 224 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 MKS1Q9NXB0 559 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 ST3GAL5Q9UNP4 418 aa4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 TTBK1Q5TCY1 1321 aaPredicted RBP4.18□□□□□ -1.74
LAPTM4A-202ENST00000483117 CCDC195A0A1B0GUA6 201 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 CCDC151A5D8V7 595 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 MANSC4A6NHS7 340 aaPredicted RBP4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 CCDC154A6NI56 674 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 LINC00473A8K010 186 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 VWC2LB2RUY7 222 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PCDHGA12O60330 932 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 ANXA11P50995 505 aaKnown RBP4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 SLC16A1P53985 500 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PTPRRQ15256 657 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 NBPF8Q3BBV2 869 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 GADL1Q6ZQY3 521 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 AMIGO2Q86SJ2 522 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 DDB2Q92466 427 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 SNX19Q92543 992 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 SARAFQ96BY9 339 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 FAXDC2Q96IV6 333 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 PGBD1Q96JS3 809 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 CLPTM1LQ96KA5 538 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 DMRTA2Q96SC8 542 aa4.17□□□□□ -1.74
LAPTM4A-202ENST00000483117 SLC29A3Q9BZD2 475 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms