RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 MANSC1Q9H8J5 431 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 PFDN4Q9NQP4 134 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 USP40Q9NVE5 1235 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 INTS10Q9NVR2 710 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 CALCOCO1Q9P1Z2 691 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 TBC1D14Q9P2M4 693 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 DKK3Q9UBP4 350 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 CTNNA3Q9UI47 895 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 NAGPAQ9UK23 515 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 CA14Q9ULX7 337 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 ATP6V0A2Q9Y487 856 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 KIF3AQ9Y496 699 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 USP15Q9Y4E8 981 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 CDY2AQ9Y6F7 541 aa5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 COL17A1Q9UMD9 1497 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-216ENST00000483065 SSU72P8A0A1W2PR75 194 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 H0Y3Z8 333 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 DDX39AO00148 427 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 KIAA0355O15063 1070 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 SPTLC2O15270 562 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 BEST1O76090 585 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 PRPF6O94906 941 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 ENDOD1O94919 500 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CSPG5O95196 566 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 APOL3O95236 402 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 GOSR1O95249 250 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 AFPP02771 609 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CSF1P09603 554 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CCDC159P0C7I6 412 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 BMP4P12644 408 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 LAMP2P13473 410 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 IFNGR1P15260 489 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 LAG3P18627 525 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 RXRAP19793 462 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CTSSP25774 331 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 AOAHP28039 575 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 ADH6P28332 368 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 BCL6P41182 706 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 ARFIP2P53365 341 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CSE1LP55060 971 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CDC42EP1Q00587 391 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 PPARDQ03181 441 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 YWHAHQ04917 246 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 MGAT2Q10469 447 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 MTA1Q13330 715 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 SNW1Q13573 536 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 TRIM71Q2Q1W2 868 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 SNX30Q5VWJ9 437 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CPZQ66K79 652 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 ATG16L1Q676U5 607 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CRTC3Q6UUV7 619 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 ATF7IPQ6VMQ6 1270 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 GADL1Q6ZQY3 521 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 LRRC8DQ7L1W4 858 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 RAB11FIP2Q7L804 512 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 DIS3L2Q8IYB7 885 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CCDC170Q8IYT3 715 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 LRRC71Q8N4P6 559 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 C10orf53Q8N6V4 93 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 POMGNT2Q8NAT1 580 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 KAT5Q92993 513 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 RAB3IPQ96QF0 476 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 UIMC1Q96RL1 719 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 TWNKQ96RR1 684 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 CITED2Q99967 270 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 RTKNQ9BST9 563 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 DESI2Q9BSY9 194 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 MAK16Q9BXY0 300 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 POFUT1Q9H488 388 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 RBM12Q9NTZ6 932 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 RGL1Q9NZL6 768 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 COL20A1Q9P218 1284 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 ZNF212Q9UDV6 495 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 RGS17Q9UGC6 210 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 ZC3H7BQ9UGR2 993 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 TBK1Q9UHD2 729 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 HOOK1Q9UJC3 728 aaKnown RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 ZNF215Q9UL58 517 aaPredicted RBP5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 DUSP12Q9UNI6 340 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 HDAC5Q9UQL6 1122 aa5.61□□□□□ -1.51
R3HDM1-216ENST00000483065 MEGF11A6BM72 1044 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 TRIM43BA6NCK2 446 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 ARNTLO00327 626 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 TSPAN4O14817 238 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 PRKCBP05771 671 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 GSTM1P09488 218 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 TMEM253P0C7T8 217 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 KRT13P13646 458 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 VAV1P15498 845 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 NPR1P16066 1061 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 CD68P34810 354 aaPredicted RBP5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 GRK5P34947 590 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 PSMB10P40306 273 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 CCR5P51681 352 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 HTRA4P83105 476 aaPredicted RBP5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 MXRA7P84157 204 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 ROM1Q03395 351 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 LRRC74AQ0VAA2 488 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 AP1B1Q10567 949 aa5.6□□□□□ -1.51
R3HDM1-216ENST00000483065 AIMP1Q12904 312 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms