RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 KCNH3Q9ULD8 1083 aa25.47■■□□□ 1.67
RHBDF1-208ENST00000482904 MTCL1Q9Y4B5 1905 aaKnown RBP25.47■■□□□ 1.67
RHBDF1-208ENST00000482904 ARHGEF37A1IGU5 675 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 GOLGA8IPA6NC78 632 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 GOLGA8JA6NMD2 632 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 ABLIM3O94929 683 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 ATF2P15336 505 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 TDGQ13569 410 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 BECN1Q14457 450 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 PABPC1LQ4VXU2 614 aaKnown RBP25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 TPGS2Q68CL5 300 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 EFCAB13Q8IY85 973 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 GLIS3Q8NEA6 775 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 C7orf25Q9BPX7 421 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 OXCT2Q9BYC2 517 aaPredicted RBP25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 PCIF1Q9H4Z3 704 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 DPP3Q9NY33 737 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 ATP6V1DQ9Y5K8 247 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 TECTAO75443 2155 aa25.46■■□□□ 1.67
RHBDF1-208ENST00000482904 EIF3DO15371 548 aaKnown RBP eCLIP25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 PAX3P23760 479 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 AFMP43652 599 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 LILRA4P59901 499 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 TFAMQ00059 246 aaKnown RBP25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 OVOS1Q6IE37 1185 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 CNNM4Q6P4Q7 775 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 UNC13DQ70J99 1090 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 NT5DC4Q86YG4 428 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 FBXL6Q8N531 539 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 SENP8Q96LD8 212 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 HCFC1R1Q9NWW0 138 aa25.45■■□□□ 1.66
RHBDF1-208ENST00000482904 EXTL3O43909 919 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 TYMPP19971 482 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 CASP1P29466 404 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 TAF6P49848 677 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 ADCY1Q08828 1119 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 TCEAL8Q8IYN2 117 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 GPD1LQ8N335 351 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 ZSWIM2Q8NEG5 633 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 LEO1Q8WVC0 666 aaPredicted RBP25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 ZNF560Q96MR9 790 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 AFF4Q9UHB7 1163 aaKnown RBP25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 CDH7Q9ULB5 785 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 ZDHHC9Q9Y397 364 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 INSL5Q9Y5Q6 135 aa25.44■■□□□ 1.66
RHBDF1-208ENST00000482904 ANO9A1A5B4 782 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 OR6C75A6NL08 312 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 PIRO00625 290 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 KIAA0391O15091 583 aaKnown RBP25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 SPTLC1O15269 473 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 OAZ2O95190 189 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 LAMP2P13473 410 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 ELMOD1Q8N336 334 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 RSAD2Q8WXG1 361 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 CHAMP1Q96JM3 812 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 SERTAD1Q9UHV2 236 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 FBXL21Q9UKT6 434 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 DUSP12Q9UNI6 340 aa25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 ZFP37Q9Y6Q3 630 aaPredicted RBP25.43■■□□□ 1.66
RHBDF1-208ENST00000482904 UBE4BO95155 1302 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 SEC24AO95486 1093 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 OR4Q2P0C623 313 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 PFKFB1P16118 471 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 SV2CQ496J9 727 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 RNF19BQ6ZMZ0 732 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 METTL23Q86XA0 190 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 GRAMD1CQ8IYS0 662 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 FAM122AQ96E09 287 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 PGLYRP2Q96PD5 576 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 MFSD1Q9H3U5 465 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 DNMT3BQ9UBC3 853 aaKnown RBP25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 DSEQ9UL01 958 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 MAFFQ9ULX9 164 aa25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 MRPS23Q9Y3D9 190 aaKnown RBP25.42■■□□□ 1.66
RHBDF1-208ENST00000482904 RHOP08100 348 aa25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 SLFN14P0C7P3 912 aa25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 CUL4BQ13620 913 aa25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 NELFCDQ8IXH7 590 aa25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 ITFG1Q8TB96 612 aa25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 CACTINQ8WUQ7 758 aaKnown RBP25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 ING5Q8WYH8 240 aa25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 FGF13Q92913 245 aa25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 NXPE3Q969Y0 559 aa25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 ARIH1Q9Y4X5 557 aaPredicted RBP25.41■■□□□ 1.66
RHBDF1-208ENST00000482904 A0A1B0GVL5 298 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 CYB561D2O14569 222 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 PDGFBP01127 241 aaPredicted RBP25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 ITGB3P05106 788 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 TMEM191BP0C7N4 346 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 POLR2BP30876 1174 aaKnown RBP25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 PNPLA4P41247 253 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 WNT7BP56706 349 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 TWF1Q12792 350 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 EPM2AIP1Q7L775 607 aaPredicted RBP25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 CORO1BQ9BR76 489 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 HSPBP1Q9NZL4 362 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 NUMBLQ9Y6R0 609 aa25.4■■□□□ 1.66
RHBDF1-208ENST00000482904 ANK1P16157 1881 aa25.39■■□□□ 1.66
RHBDF1-208ENST00000482904 PVALEFA0A1B0GWK0 134 aa25.39■■□□□ 1.66
RHBDF1-208ENST00000482904 ACTN4O43707 911 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms