RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 DNAAF5Q86Y56 855 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 BRSK2Q8IWQ3 736 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 FUKQ8N0W3 1084 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 PPM1KQ8N3J5 372 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 MMGT1Q8N4V1 131 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 KLHDC9Q8NEP7 349 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 SH3TC2Q8TF17 1288 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 TMEM40Q8WWA1 233 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 WNT8BQ93098 351 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 CAVIN3Q969G5 261 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 CGRRF1Q99675 332 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 STK33Q9BYT3 514 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 RAB20Q9NX57 234 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 AIPL1Q9NZN9 384 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 TRIM17Q9Y577 477 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 SAR1BQ9Y6B6 198 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 PTCH2Q9Y6C5 1203 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 FRMPD3Q5JV73 1810 aa11.13□□□□□ -0.63
APTX-225ENST00000482687 RCCD1A6NED2 376 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 F8VZ95 297 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 FOXN3O00409 490 aaPredicted RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 NPTXRO95502 500 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 HLA-DRAP01903 254 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 STAG3L1P0CL83 205 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 GTF2H1P32780 548 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 GCKP35557 465 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 STAT1P42224 750 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 PIK3CAP42336 1068 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 EPHB4P54760 987 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 PDCLQ13371 301 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 PTGISQ16647 500 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 TTMPQ5BVD1 217 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 C15orf39Q6ZRI6 1047 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 ZNF571Q7Z3V5 609 aaPredicted RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 USP37Q86T82 979 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 FAM228AQ86W67 206 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 FBXL13Q8NEE6 735 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 DHX38Q92620 1227 aaKnown RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 SYN2Q92777 582 aaPredicted RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 KREMEN1Q96MU8 473 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 RUFY1Q96T51 708 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 NUCKS1Q9H1E3 243 aaKnown RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 TRIP11Q15643 1979 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 ANO9A1A5B4 782 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 LIN7AO14910 233 aaPredicted RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 HSF2BPO75031 334 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 FAM107AO95990 144 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 CALCAP01258 141 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 CTSHP09668 335 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 MYBL2P10244 700 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 GNAT1P11488 350 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 NEFHP12036 1026 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 DARSP14868 501 aaKnown RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 SOX5P35711 763 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 PTK2Q05397 1052 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 XRCC4Q13426 336 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 NAA25Q14CX7 972 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 PDCD2Q16342 344 aaPredicted RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 LACTB2Q53H82 288 aaPredicted RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 FAM43BQ6ZT52 329 aaPredicted RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 CCDC121Q6ZUS5 278 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 CCDC170Q8IYT3 715 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 CCDC114Q96M63 670 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 EIF2AQ9BY44 585 aaKnown RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 MTMR12Q9C0I1 747 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 CXCL16Q9H2A7 254 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 RPF1Q9H9Y2 349 aaKnown RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 RNF19AQ9NV58 838 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 GTF2IRD1Q9UHL9 959 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 FBXL5Q9UKA1 691 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 TPX2Q9ULW0 747 aaKnown RBP11.12□□□□□ -0.63
APTX-225ENST00000482687 HTTP42858 3142 aa11.12□□□□□ -0.63
APTX-225ENST00000482687 LACTBL1A8MY62 500 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 EVI5O60447 810 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 CST3P01034 146 aaPredicted RBP11.11□□□□□ -0.63
APTX-225ENST00000482687 MCF2P10911 925 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 HOXC8P31273 242 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 GRK4P32298 578 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 GBP2P32456 591 aaPredicted RBP11.11□□□□□ -0.63
APTX-225ENST00000482687 CLDN10P78369 228 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 SNX17Q15036 470 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 ASTE1Q2TB18 679 aaPredicted RBP11.11□□□□□ -0.63
APTX-225ENST00000482687 ZACNQ401N2 412 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 RNF187Q5TA31 235 aaPredicted RBP11.11□□□□□ -0.63
APTX-225ENST00000482687 CCSAPQ6IQ19 270 aaPredicted RBP11.11□□□□□ -0.63
APTX-225ENST00000482687 NLRP14Q86W24 1093 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 CD302Q8IX05 232 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 MYCBPAPQ8TBZ2 947 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 HELQQ8TDG4 1101 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 MICAL1Q8TDZ2 1067 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 JAKMIP2Q96AA8 810 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 NT5C1BQ96P26 610 aa11.11□□□□□ -0.63
APTX-225ENST00000482687 LACRTQ9GZZ8 138 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms