RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 RSPO2Q6UXX9 243 aaPredicted RBP8.44□□□□□ -1.06
CCNC-204ENST00000482541 SLC44A3Q8N4M1 653 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 APPL2Q8NEU8 664 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 LRRC15Q8TF66 581 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 SUSD3Q96L08 255 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 MYADMQ96S97 322 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 FIZ1Q96SL8 496 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 PRR14Q9BWN1 585 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 HAPLN2Q9GZV7 340 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 ZHX3Q9H4I2 956 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 WNT16Q9UBV4 365 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 MAFFQ9ULX9 164 aa8.44□□□□□ -1.06
CCNC-204ENST00000482541 UBQLN1Q9UMX0 589 aaKnown RBP8.44□□□□□ -1.06
CCNC-204ENST00000482541 ZNF318Q5VUA4 2279 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 ANHXE9PGG2 379 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 I3L4J1 428 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 STX6O43752 255 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 PDGFBP01127 241 aaPredicted RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 CXCL8P10145 99 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 FSHRP23945 695 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 MCM4P33991 863 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 PTPN5P54829 565 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 VCPP55072 806 aaKnown RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 POU5F1Q01860 360 aaKnown RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 PPP2R3AQ06190 1150 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 SPECC1Q5M775 1068 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 RRAGBQ5VZM2 374 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 TPGS2Q68CL5 300 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 USP49Q70CQ1 688 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 SV2BQ7L1I2 683 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 ZNF720Q7Z2F6 126 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 GRASPQ7Z6J2 395 aaPredicted RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 SLC7A14Q8TBB6 771 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 LRRN4Q8WUT4 740 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 SNX21Q969T3 373 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 C18orf25Q96B23 403 aaPredicted RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 OXCT2Q9BYC2 517 aaPredicted RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 MFSD1Q9H3U5 465 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 SMOC2Q9H3U7 446 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 RPF1Q9H9Y2 349 aaKnown RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 SEL1LQ9UBV2 794 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 KCNH3Q9ULD8 1083 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 MTMR6Q9Y217 621 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 PDCD11Q14690 1871 aaKnown RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 TRIOO75962 3097 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 ARHGEF37A1IGU5 675 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 LACTBL1A8MY62 500 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 M0QZQ0 153 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 FAM189A1O60320 539 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 SRFP11831 508 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 NMT1P30419 496 aaKnown RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 ELF1P32519 619 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 TNFSF9P41273 254 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 CEBPZQ03701 1054 aaKnown RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 POSTNQ15063 836 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 CTXN3Q4LDR2 81 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 FAM173BQ6P4H8 233 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 CCDC73Q6ZRK6 1079 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 GET4Q7L5D6 327 aaPredicted RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 MAP4K3Q8IVH8 894 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 TCEAL8Q8IYN2 117 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 PRSS33Q8NF86 280 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 WNT2BQ93097 391 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 HVCN1Q96D96 273 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 USP28Q96RU2 1077 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 MSTO1Q9BUK6 570 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 ASB7Q9H672 318 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 DNMT3BQ9UBC3 853 aaKnown RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 FBXL5Q9UKA1 691 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 CPSF3Q9UKF6 684 aaKnown RBP8.43□□□□□ -1.06
CCNC-204ENST00000482541 CDH7Q9ULB5 785 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 POLIQ9UNA4 740 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 STYXL1Q9Y6J8 313 aa8.43□□□□□ -1.06
CCNC-204ENST00000482541 KMT2EQ8IZD2 1858 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 CCL16O15467 120 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 OAZ2O95190 189 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 GAP43P17677 238 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 PTPN2P17706 415 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 NASPP49321 788 aaPredicted RBP8.42□□□□□ -1.06
CCNC-204ENST00000482541 AARSP49588 968 aaKnown RBP eCLIP8.42□□□□□ -1.06
CCNC-204ENST00000482541 ROR1Q01973 937 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 TCF15Q12870 199 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 ENOX2Q16206 610 aaKnown RBP8.42□□□□□ -1.06
CCNC-204ENST00000482541 SPATA1Q5VX52 437 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 ZNF280DQ6N043 979 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 DYMQ7RTS9 669 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 RSAD2Q8WXG1 361 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 FGF13Q92913 245 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 CLIC6Q96NY7 704 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 STRA6Q9BX79 667 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 AVENQ9NQS1 362 aaPredicted RBP8.42□□□□□ -1.06
CCNC-204ENST00000482541 OLFML3Q9NRN5 406 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 TSR3Q9UJK0 312 aaKnown RBP8.42□□□□□ -1.06
CCNC-204ENST00000482541 FBXL21Q9UKT6 434 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 DERAQ9Y315 318 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 DOCK8Q8NF50 2099 aa8.42□□□□□ -1.06
CCNC-204ENST00000482541 WDR27A2RRH5 827 aa8.41□□□□□ -1.06
CCNC-204ENST00000482541 PRRG1O14668 218 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms