RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TXNRD2Q9NNW7 524 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 FGFR1OP2Q9NVK5 253 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 NINJ2Q9NZG7 142 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 SAMD15Q9P1V8 674 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 PCDHA10Q9Y5I2 948 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 TCP11X1B4DZS4 312 aa15.81■□□□□ 0.12
ATG4B-220ENST00000482507 RGS20O76081 388 aa15.81■□□□□ 0.12
ATG4B-220ENST00000482507 ECM2O94769 699 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-220ENST00000482507 GJB6O95452 261 aa15.81■□□□□ 0.12
ATG4B-220ENST00000482507 CYP1A1P04798 512 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-220ENST00000482507 ELF3P78545 371 aaPredicted RBP15.81■□□□□ 0.12
ATG4B-220ENST00000482507 SEPT14Q6ZU15 432 aa15.81■□□□□ 0.12
ATG4B-220ENST00000482507 TRPM8Q7Z2W7 1104 aa15.81■□□□□ 0.12
ATG4B-220ENST00000482507 PASD1Q8IV76 773 aa15.81■□□□□ 0.12
ATG4B-220ENST00000482507 PTPN18Q99952 460 aa15.81■□□□□ 0.12
ATG4B-220ENST00000482507 PAPPA2Q9BXP8 1791 aa15.81■□□□□ 0.12
ATG4B-220ENST00000482507 MGRN1O60291 552 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 VNN1O95497 513 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 FDX1P10109 184 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 ACO1P21399 889 aaKnown RBP15.8■□□□□ 0.12
ATG4B-220ENST00000482507 SP4Q02446 784 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 CENPCQ03188 943 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 BAATQ14032 418 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-220ENST00000482507 SNCBQ16143 134 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 Q3C1V9 767 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 TDRD10Q5VZ19 366 aaKnown RBP15.8■□□□□ 0.12
ATG4B-220ENST00000482507 FASTKD5Q7L8L6 764 aaKnown RBP15.8■□□□□ 0.12
ATG4B-220ENST00000482507 PLVAPQ9BX97 442 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 HAPLN2Q9GZV7 340 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 APOBEC3GQ9HC16 384 aaKnown RBP15.8■□□□□ 0.12
ATG4B-220ENST00000482507 C1orf112Q9NSG2 853 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 ABT1Q9ULW3 272 aaKnown RBP15.8■□□□□ 0.12
ATG4B-220ENST00000482507 PCDHB2Q9Y5E7 798 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 CENPFP49454 3210 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 BTBD19C9JJ37 291 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 PROSCO94903 275 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 HLA-DRAP01903 254 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 ATF2P15336 505 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 ADCY8P40145 1251 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 GSCP56915 257 aaPredicted RBP15.8■□□□□ 0.12
ATG4B-220ENST00000482507 SWSAP1Q6NVH7 229 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 ANKRD42Q8N9B4 389 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 C11orf70Q9BRQ4 267 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 HOMER3Q9NSC5 361 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 RNF146Q9NTX7 359 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 ANAPC5Q9UJX4 755 aa15.8■□□□□ 0.12
ATG4B-220ENST00000482507 KCNA2P16389 499 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 GARTP22102 1010 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 NLRP11P59045 1033 aaKnown RBP15.79■□□□□ 0.12
ATG4B-220ENST00000482507 BRDTQ58F21 947 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-220ENST00000482507 ENOSF1Q7L5Y1 443 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 VSIG10LQ86VR7 867 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 CCDC50Q8IVM0 306 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 CCDC60Q8IWA6 550 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-220ENST00000482507 ATL2Q8NHH9 583 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 GDAP1Q8TB36 358 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 BICD1Q96G01 975 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 YY1AP1Q9H869 796 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 MAP3K20Q9NYL2 800 aaKnown RBP15.79■□□□□ 0.12
ATG4B-220ENST00000482507 ARHGAP28Q9P2N2 729 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 WDR81Q562E7 1941 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 PDHXO00330 501 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 THAP12O43422 761 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 ZC3H11AO75152 810 aaKnown RBP eCLIP15.79■□□□□ 0.122e-8■□□□□ 9.8
ATG4B-220ENST00000482507 UBOX5O94941 541 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 C4BPAP04003 597 aaKnown RBP15.79■□□□□ 0.12
ATG4B-220ENST00000482507 TCF4P15884 667 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 SLC1A1P43005 524 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 NSFP46459 744 aaKnown RBP15.79■□□□□ 0.12
ATG4B-220ENST00000482507 ACOT2P49753 483 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 CLDN10P78369 228 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 ZACNQ401N2 412 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 ZBTB41Q5SVQ8 909 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 TMEM63BQ5T3F8 832 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 HIBCHQ6NVY1 386 aaPredicted RBP15.79■□□□□ 0.12
ATG4B-220ENST00000482507 LBX2Q6XYB7 198 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 NLRX1Q86UT6 975 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 TAX1BP1Q86VP1 789 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 DYDC1Q8WWB3 177 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 SENP7Q9BQF6 1050 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 KCNK9Q9NPC2 374 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 RBPJLQ9UBG7 517 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 TBK1Q9UHD2 729 aa15.79■□□□□ 0.12
ATG4B-220ENST00000482507 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 GAS8O95995 478 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 NR3C2P08235 984 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 CD58P19256 250 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 YY1P25490 414 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 GJC1P36383 396 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 GTF2A2P52657 109 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 ADCY1Q08828 1119 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 MAMLD1Q13495 774 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 PREPLQ4J6C6 727 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-220ENST00000482507 CRELD2Q6UXH1 353 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-220ENST00000482507 SYDE1Q6ZW31 735 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-220ENST00000482507 GLIS1Q8NBF1 620 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 SMC1BQ8NDV3 1235 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 ZBTB45Q96K62 511 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-220ENST00000482507 C9orf72Q96LT7 481 aa15.78■□□□□ 0.12
ATG4B-220ENST00000482507 SCLT1Q96NL6 688 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms