RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 RFX1P22670 979 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 MKRN3Q13064 507 aaKnown RBP13.43□□□□□ -0.26
VPS52-218ENST00000482399 TFDP1Q14186 410 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 RBBP5Q15291 538 aaKnown RBP13.43□□□□□ -0.26
VPS52-218ENST00000482399 CYP4A22Q5TCH4 519 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 C6orf163Q5TEZ5 329 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 DNAJC24Q6P3W2 148 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 LRRC6Q86X45 466 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 FAM71AQ8IYT1 594 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 SLC25A41Q8N5S1 370 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 TEKT4Q8WW24 435 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 L3MBTL3Q96JM7 780 aaPredicted RBP13.43□□□□□ -0.26
VPS52-218ENST00000482399 TRIM55Q9BYV6 548 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 LRRC19Q9H756 370 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 SMYD3Q9H7B4 428 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 NXF1Q9UBU9 619 aaKnown RBP13.43□□□□□ -0.26
VPS52-218ENST00000482399 UBR2Q8IWV8 1755 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 DPPA5A6NC42 116 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 NVLO15381 856 aaKnown RBP13.43□□□□□ -0.26
VPS52-218ENST00000482399 ENO1P06733 434 aaKnown RBP13.43□□□□□ -0.26
VPS52-218ENST00000482399 INHBAP08476 426 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 GYS1P13807 737 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 CALB2P22676 271 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 NLRX1Q86UT6 975 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 AGGF1Q8N302 714 aaeCLIP13.43□□□□□ -0.26
VPS52-218ENST00000482399 GRAMD1AQ96CP6 724 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
VPS52-218ENST00000482399 IWS1Q96ST2 819 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 TRIM4Q9C037 500 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 SCOCQ9UIL1 159 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 CFHP08603 1231 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 ZBTB48P10074 688 aaPredicted RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 MARK3P27448 753 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 RPL7AP62424 266 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 NFX1Q12986 1120 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 TRAF1Q13077 416 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 RIPK1Q13546 671 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 HIF1AQ16665 826 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 AOC3Q16853 763 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 MFSD5Q6N075 450 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 TLDC1Q6P9B6 456 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 MFSD7Q6UXD7 560 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 ZC3H3Q8IXZ2 948 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 MCOLN2Q8IZK6 566 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 OGFOD1Q8N543 542 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 STK32AQ8WU08 396 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 HSPH1Q92598 858 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 FAM111AQ96PZ2 611 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 ARHGEF3Q9NR81 526 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 STOML1Q9UBI4 398 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 FAM198AQ9UFP1 575 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 MAD1L1Q9Y6D9 718 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 IGLV3-22A0A075B6J6 115 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 ITGB5P18084 799 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 GCLCP48506 637 aaPredicted RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 ARHGEF16Q5VV41 709 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 RFWD3Q6PCD5 774 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 SLC30A9Q6PML9 568 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 MORC4Q8TE76 937 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 PRMT6Q96LA8 375 aaPredicted RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 GLIS2Q9BZE0 524 aaPredicted RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 MRPL47Q9HD33 250 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 SLC5A4Q9NY91 659 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 GABBR1Q9UBS5 961 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 NOCTQ9UK39 431 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 USP21Q9UK80 565 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 PLCH1Q4KWH8 1693 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 FSCN2O14926 492 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 OPHN1O60890 802 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 KRT36O76013 467 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 SERPINB3P29508 390 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 IRX1P78414 480 aaPredicted RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 CAV1Q03135 178 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 ORC1Q13415 861 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 DGKZQ13574 1117 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 MTMR2Q13614 643 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 THOC5Q13769 683 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 KPNB1Q14974 876 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 RC3H1Q5TC82 1133 aaKnown RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 CCDC33Q8N5R6 958 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 PPM1NQ8N819 430 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 LRRN4Q8WUT4 740 aa13.42□□□□□ -0.26
VPS52-218ENST00000482399 DENND2DQ9H6A0 471 aaPredicted RBP13.42□□□□□ -0.26
VPS52-218ENST00000482399 SPDYE5A6NIY4 337 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 H3BRJ5 948 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 LPXNO60711 386 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 TJP3O95049 919 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 SKIP12755 728 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 TCF4P15884 667 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 NPTX2P47972 431 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 NRLP54845 237 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 CLEC16AQ2KHT3 1053 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 FAXCQ5TGI0 409 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 SCYL2Q6P3W7 929 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 RFX6Q8HWS3 928 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 SIAH1Q8IUQ4 282 aa13.41□□□□□ -0.26
VPS52-218ENST00000482399 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms