RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 HPS3Q969F9 1004 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 DHX58Q96C10 678 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 ZNF396Q96N95 335 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-212ENST00000482251 TMEM209Q96SK2 561 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 CORO1BQ9BR76 489 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 KCNH6Q9H252 994 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 ST6GALNAC4Q9H4F1 302 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 PANK4Q9NVE7 773 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 SEL1LQ9UBV2 794 aa11.36□□□□□ -0.59
CPSF4-212ENST00000482251 MRPS23Q9Y3D9 190 aaKnown RBP11.36□□□□□ -0.59
CPSF4-212ENST00000482251 KRBA1A5PL33 1030 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 GOLGA8IPA6NC78 632 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 GOLGA8JA6NMD2 632 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 ANHXE9PGG2 379 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 M0QZQ0 153 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 STK25O00506 426 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 NRG2O14511 850 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-212ENST00000482251 PI15O43692 258 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 PRPF6O94906 941 aaKnown RBP11.35□□□□□ -0.59
CPSF4-212ENST00000482251 F13A1P00488 732 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 ZSCAN22P10073 491 aaPredicted RBP11.35□□□□□ -0.59
CPSF4-212ENST00000482251 ATF2P15336 505 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 NPR3P17342 541 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 CYP3A5P20815 502 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 ADSSP30520 456 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 ABCD1P33897 745 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 AARSP49588 968 aaKnown RBP eCLIP11.35□□□□□ -0.59
CPSF4-212ENST00000482251 MRE11P49959 708 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 TWF1Q12792 350 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 UVSSAQ2YD98 709 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 C9orf57Q5W0N0 161 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 SLFN12LQ6IEE8 588 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 SHC4Q6S5L8 630 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 SYCP3Q8IZU3 236 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 TTC9BQ8N6N2 239 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 TCEAL4Q96EI5 215 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 MCRS1Q96EZ8 462 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 ACCSQ96QU6 501 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 FAM213AQ9BRX8 229 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 YIPF1Q9Y548 306 aa11.35□□□□□ -0.59
CPSF4-212ENST00000482251 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 FRMD3A2A2Y4 597 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-212ENST00000482251 PPP6R2O75170 966 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 SOAT2O75908 522 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 VNN2O95498 520 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 YEATS4O95619 227 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 ADRB2P07550 413 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 POU2F2P09086 479 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 ODC1P11926 461 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 GJA1P17302 382 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 CASP1P29466 404 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 CCR2P41597 374 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 LILRA4P59901 499 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 ASIC1P78348 528 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 TFAMQ00059 246 aaKnown RBP11.34□□□□□ -0.59
CPSF4-212ENST00000482251 E2F4Q16254 413 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 TPGS2Q68CL5 300 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 OVOS1Q6IE37 1185 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 POTEHQ6S545 545 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 CRELD2Q6UXH1 353 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-212ENST00000482251 CD302Q8IX05 232 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 TCEAL8Q8IYN2 117 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 ATOH1Q92858 354 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-212ENST00000482251 SENP8Q96LD8 212 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 CBWD1Q9BRT8 395 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 STRA6Q9BX79 667 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 CRISPLD1Q9H336 500 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 PCIF1Q9H4Z3 704 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 TBC1D17Q9HA65 648 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 ARHGEF3Q9NR81 526 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 OLFML3Q9NRN5 406 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 AFF4Q9UHB7 1163 aaKnown RBP11.34□□□□□ -0.59
CPSF4-212ENST00000482251 EXOC7Q9UPT5 735 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 STYXL1Q9Y6J8 313 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 MORC2Q9Y6X9 1032 aaPredicted RBP11.34□□□□□ -0.59
CPSF4-212ENST00000482251 SCN1AP35498 2009 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 TCHHQ07283 1943 aa11.34□□□□□ -0.59
CPSF4-212ENST00000482251 CUTAO60888 179 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 MYL4P12829 197 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 PTPN2P17706 415 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 AOC1P19801 751 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 ME1P48163 572 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 GPC5P78333 572 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 PRSS36Q5K4E3 855 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 LMBRD2Q68DH5 695 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-212ENST00000482251 ARMCX5Q6P1M9 558 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 MTSS1LQ765P7 747 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 PDZD4Q76G19 769 aaPredicted RBP11.33□□□□□ -0.6
CPSF4-212ENST00000482251 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 ELMOD1Q8N336 334 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 OR10T2Q8NGX3 314 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 NXPE3Q969Y0 559 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 CHAMP1Q96JM3 812 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 PRRX2Q99811 253 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 PYM1Q9BRP8 204 aaKnown RBP11.33□□□□□ -0.6
CPSF4-212ENST00000482251 FOXQ1Q9C009 403 aa11.33□□□□□ -0.6
CPSF4-212ENST00000482251 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms