RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMGN1-213ENST00000482192 LIMD1Q9UGP4 676 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 SERTAD1Q9UHV2 236 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-213ENST00000482192 A0A1B0GVL5 298 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 GOLGA8IPA6NC78 632 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 GOLGA8JA6NMD2 632 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 PRRG1O14668 218 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 PPEF2O14830 753 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 CCL16O15467 120 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 MYL1P05976 194 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 ODC1P11926 461 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 CPB1P15086 417 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 ATF2P15336 505 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 TYMPP19971 482 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 CASP1P29466 404 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 GBP2P32456 591 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-213ENST00000482192 ELF1P32519 619 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 SIGLEC14Q08ET2 396 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 CUL4BQ13620 913 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 TPGS2Q68CL5 300 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 GRASPQ7Z6J2 395 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-213ENST00000482192 EFCAB13Q8IY85 973 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 TCEAL8Q8IYN2 117 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
HMGN1-213ENST00000482192 PAGE5Q96GU1 130 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 PCIF1Q9H4Z3 704 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 MAFFQ9ULX9 164 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 POLIQ9UNA4 740 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 HPSEQ9Y251 543 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 HCN4Q9Y3Q4 1203 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 TIMM13Q9Y5L4 95 aaPredicted RBP12.86□□□□□ -0.35
HMGN1-213ENST00000482192 TRIP11Q15643 1979 aa12.86□□□□□ -0.35
HMGN1-213ENST00000482192 A0A1W2PQ27 194 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 A0A1W2PQ64 194 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 A0A1W2PQD8 194 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 TMEM221A6NGB7 291 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 M0R296 226 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-213ENST00000482192 SPTLC1O15269 473 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
HMGN1-213ENST00000482192 LRG1P02750 347 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 ASGR2P07307 311 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 FSHRP23945 695 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 HOXD13P35453 343 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 PNPLA4P41247 253 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 TAF6P49848 677 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 SNRPFP62306 86 aaKnown RBP12.85□□□□□ -0.35
HMGN1-213ENST00000482192 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
HMGN1-213ENST00000482192 OVOS1Q6IE37 1185 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-213ENST00000482192 HS2ST1Q7LGA3 356 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 GRAMD1CQ8IYS0 662 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 ZSWIM2Q8NEG5 633 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 CACTINQ8WUQ7 758 aaKnown RBP12.85□□□□□ -0.35
HMGN1-213ENST00000482192 SCFD1Q8WVM8 642 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 SENP8Q96LD8 212 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 ZNF560Q96MR9 790 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 CYP4F11Q9HBI6 524 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 KIAA1586Q9HCI6 787 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 IGSF9Q9P2J2 1179 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 EPS15L1Q9UBC2 864 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 DSEQ9UL01 958 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 ZFP37Q9Y6Q3 630 aaPredicted RBP12.85□□□□□ -0.35
HMGN1-213ENST00000482192 C2orf16Q68DN1 1984 aa12.85□□□□□ -0.35
HMGN1-213ENST00000482192 FAM237AA0A1B0GTK4 181 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 ZNF233A6NK53 670 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 OR6C75A6NL08 312 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 SYKP43405 635 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 NDUFA8P51970 172 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 WNT7BP56706 349 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 NUCB2P80303 420 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 BMT2Q1RMZ1 405 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 SV2CQ496J9 727 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
HMGN1-213ENST00000482192 HFE2Q6ZVN8 426 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 BMP8AQ7Z5Y6 402 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 NELFCDQ8IXH7 590 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 MFSD14AQ96MC6 490 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 MYADMQ96S97 322 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 KCNK12Q9HB15 430 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 SLC39A2Q9NP94 309 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 AGPAT3Q9NRZ7 376 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 EXOC1Q9NV70 894 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 AFF4Q9UHB7 1163 aaKnown RBP12.84□□□□□ -0.35
HMGN1-213ENST00000482192 ITGA11Q9UKX5 1188 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
HMGN1-213ENST00000482192 KPNA7A9QM74 516 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 CYB561D2O14569 222 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 TGFB1I1O43294 461 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 SEC24AO95486 1093 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 ITGB3P05106 788 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 CYP11A1P05108 521 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 LAMP2P13473 410 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
HMGN1-213ENST00000482192 NTHL1P78549 312 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 PSMD2Q13200 908 aa12.83□□□□□ -0.36
HMGN1-213ENST00000482192 TDGQ13569 410 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms