RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 CSF2RAP15509 400 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 ANXA13P27216 316 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 ASPAP45381 313 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 PPIGQ13427 754 aaKnown RBP eCLIP13.41□□□□□ -0.26
IFT88-206ENST00000482172 TUSC3Q13454 348 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 WDR72Q3MJ13 1102 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 NOMO2Q5JPE7 1267 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 CLLU1OSQ5K130 101 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 E4F1Q66K89 784 aaPredicted RBP13.41□□□□□ -0.26
IFT88-206ENST00000482172 UBR7Q8N806 425 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 KAT5Q92993 513 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 ABHD8Q96I13 439 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 ZNF830Q96NB3 372 aaPredicted RBP13.41□□□□□ -0.26
IFT88-206ENST00000482172 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 TTC3P53804 2025 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 TET1Q8NFU7 2136 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 RBAK-RBAKDNI3L0D1 243 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 EVI5O60447 810 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 POMCP01189 267 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 ACO1P21399 889 aaKnown RBP13.4□□□□□ -0.26
IFT88-206ENST00000482172 TAF6P49848 677 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 AFF1P51825 1210 aaKnown RBP13.4□□□□□ -0.26
IFT88-206ENST00000482172 BPIFB4P59827 614 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 SV2CQ496J9 727 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 HGSNATQ68CP4 663 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 CCDC170Q8IYT3 715 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 CASD1Q96PB1 797 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 MRPL9Q9BYD2 267 aaKnown RBP13.4□□□□□ -0.26
IFT88-206ENST00000482172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.4□□□□□ -0.265e-12■■■■■ 96.1
IFT88-206ENST00000482172 ARHGAP20Q9P2F6 1191 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 ZKSCAN5Q9Y2L8 839 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 LTBP2Q14767 1821 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 MICAL3Q7RTP6 2002 aa13.4□□□□□ -0.26
IFT88-206ENST00000482172 KPNA7A9QM74 516 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 PODXLO00592 558 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 GFPT2O94808 682 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 CLSTN1O94985 981 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 AMHP03971 560 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 FGFR1P11362 822 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 LILRA4P59901 499 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 TNNC1P63316 161 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 FPGSQ05932 587 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 DSC1Q08554 894 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 KLHL30Q0D2K2 578 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 UPP1Q16831 310 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 DCLRE1AQ6PJP8 1040 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
IFT88-206ENST00000482172 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 CHP1Q99653 195 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 ARID3AQ99856 593 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 NHEJ1Q9H9Q4 299 aaPredicted RBP13.39□□□□□ -0.27
IFT88-206ENST00000482172 GOLGA2P5Q9HBQ8 144 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 NXF1Q9UBU9 619 aaKnown RBP13.39□□□□□ -0.27
IFT88-206ENST00000482172 INPP5FQ9Y2H2 1132 aa13.39□□□□□ -0.27
IFT88-206ENST00000482172 PPEF2O14830 753 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 TACC1O75410 805 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 IBSPP21815 317 aaPredicted RBP13.38□□□□□ -0.27
IFT88-206ENST00000482172 CLCN1P35523 988 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 CYLC1P35663 651 aaPredicted RBP13.38□□□□□ -0.27
IFT88-206ENST00000482172 AARSP49588 968 aaKnown RBP eCLIP13.38□□□□□ -0.27
IFT88-206ENST00000482172 CLCNKBP51801 687 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 INCA1Q0VD86 236 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 COL13A1Q5TAT6 717 aaPredicted RBP13.38□□□□□ -0.27
IFT88-206ENST00000482172 LIMS2Q7Z4I7 341 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 COLGALT2Q8IYK4 626 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 C7orf61Q8IZ16 206 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 TMEM130Q8N3G9 435 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 TOP6BLQ8N6T0 577 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 BADQ92934 168 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 TOP1MTQ969P6 601 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 ELMO3Q96BJ8 720 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 CCDC42Q96M95 316 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 FAM193BQ96PV7 902 aaPredicted RBP13.38□□□□□ -0.27
IFT88-206ENST00000482172 HAUS4Q9H6D7 363 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 CISHQ9NSE2 258 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 POLIQ9UNA4 740 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 PCDHB4Q9Y5E5 795 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 EPN1Q9Y6I3 576 aaPredicted RBP13.38□□□□□ -0.27
IFT88-206ENST00000482172 TDRD15B5MCY1 1934 aaKnown RBP13.38□□□□□ -0.27
IFT88-206ENST00000482172 BRCA2P51587 3418 aa13.38□□□□□ -0.27
IFT88-206ENST00000482172 SOWAHDA6NJG2 315 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 TMEM189-UBE2V1I3L0A0 370 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 CYP26A1O43174 497 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 DGKIO75912 1065 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 LCA5LO95447 670 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 FGBP02675 491 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 WEE2P0C1S8 567 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 PNMA6AP0CW24 399 aaPredicted RBP13.37□□□□□ -0.27
IFT88-206ENST00000482172 KRT5P13647 590 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 EIF4A3P38919 411 aaKnown RBP13.37□□□□□ -0.27
IFT88-206ENST00000482172 ZNF132P52740 706 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 WDR5P61964 334 aaKnown RBP13.37□□□□□ -0.27
IFT88-206ENST00000482172 ARID5AQ03989 594 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 PTK2Q05397 1052 aa13.37□□□□□ -0.27
IFT88-206ENST00000482172 ASTE1Q2TB18 679 aaPredicted RBP13.37□□□□□ -0.27
IFT88-206ENST00000482172 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
IFT88-206ENST00000482172 PSRC1Q6PGN9 363 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms