RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 ALCAMQ13740 583 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 MYBPC2Q14324 1141 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 PRSS36Q5K4E3 855 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 SLC39A4Q6P5W5 647 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 USP37Q86T82 979 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 ELSPBP1Q96BH3 223 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 DDX23Q9BUQ8 820 aaKnown RBP13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 SEMA4AQ9H3S1 761 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 OLFML3Q9NRN5 406 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 DSEQ9UL01 958 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 SIT1Q9Y3P8 196 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 PATJQ8NI35 1801 aa13.17□□□□□ -0.3
SQSTM1-207ENST00000481335 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 K7ELQ4 463 aaPredicted RBP13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 STK25O00506 426 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 PI15O43692 258 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 NMT1P30419 496 aaKnown RBP13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 ARPP19P56211 112 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 LILRA4P59901 499 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 GPC5P78333 572 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 GPR17Q13304 367 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 TMEM132DQ14C87 1099 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 MLF2Q15773 248 aaPredicted RBP13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 CYP4A22Q5TCH4 519 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 RRAGBQ5VZM2 374 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 ADALQ6DHV7 355 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 JADE1Q6IE81 842 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 DSTYKQ6XUX3 929 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 PJA1Q8NG27 643 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 DNASE1L2Q92874 299 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 BORCS6Q96GS4 357 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 ZNF512Q96ME7 567 aaPredicted RBP13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 BACH2Q9BYV9 841 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 GPR88Q9GZN0 384 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 ASAH2Q9NR71 780 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 CACNA1IQ9P0X4 2223 aa13.16□□□□□ -0.3
SQSTM1-207ENST00000481335 F5P12259 2224 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 KANSL1LA0AUZ9 987 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 ANO9A1A5B4 782 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 PIRO00625 290 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 IL18RAPO95256 599 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 SEC24AO95486 1093 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 CYP11A1P05108 521 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 NASPP49321 788 aaPredicted RBP13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 SMARCB1Q12824 385 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 SLC39A14Q15043 492 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 OVOS1Q6IE37 1185 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 SFR1Q86XK3 245 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 NKD2Q969F2 451 aaPredicted RBP13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 E2F7Q96AV8 911 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 NELL2Q99435 816 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 CORO1BQ9BR76 489 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 RPP25Q9BUL9 199 aaKnown RBP13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 MRPL44Q9H9J2 332 aaKnown RBP13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 DLGAP2Q9P1A6 1054 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 MTMR6Q9Y217 621 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 YIPF1Q9Y548 306 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 ASB3Q9Y575 518 aa13.15□□□□□ -0.3
SQSTM1-207ENST00000481335 COL4A2P08572 1712 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 PRR23AA6NEV1 266 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 STX6O43752 255 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 FGF19O95750 216 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 CEBPBP17676 345 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 PNPLA4P41247 253 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 SPAG1Q07617 926 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 TWF1Q12792 350 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 SLC44A4Q53GD3 710 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 C9orf57Q5W0N0 161 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 ZC3H14Q6PJT7 736 aaKnown RBP13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 RNF19BQ6ZMZ0 732 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 DYMQ7RTS9 669 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 DEPDC1BQ8WUY9 529 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 ING5Q8WYH8 240 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 POMGNT1Q8WZA1 660 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 SENP8Q96LD8 212 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 ZNF560Q96MR9 790 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 ASB16Q96NS5 453 aa13.14□□□□□ -0.31
SQSTM1-207ENST00000481335 ACCSQ96QU6 501 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms