RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 NDUFV1P49821 464 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 TAF6P49848 677 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 FKBP3Q00688 224 aaKnown RBP21.95■■□□□ 1.1
CTSA-206ENST00000480961 LRRC63Q05C16 580 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 BFSP1Q12934 665 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 PAK1Q13153 545 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 C1orf220Q5T0J3 134 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 TTI2Q6NXR4 508 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 SPATA31D4Q6ZUB0 917 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 BORCS6Q96GS4 357 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 CDCA3Q99618 268 aaPredicted RBP21.95■■□□□ 1.1
CTSA-206ENST00000480961 CLSTN3Q9BQT9 956 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 UNC80Q8N2C7 3258 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.94■■□□□ 1.1
CTSA-206ENST00000480961 M0QZQ0 153 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 CYB561D2O14569 222 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 NCK2O43639 380 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 TBX10O75333 385 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 VAMP7P51809 220 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 COL19A1Q14993 1142 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 DPCR1Q3MIW9 517 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 ZC3H3Q8IXZ2 948 aaKnown RBP21.94■■□□□ 1.1
CTSA-206ENST00000480961 TMC2Q8TDI7 906 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 SLC22A17Q8WUG5 538 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 ELMO3Q96BJ8 720 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 APOL5Q9BWW9 433 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 MMRN2Q9H8L6 949 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 CLEC1BQ9P126 229 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 R3HCC1Q9Y3T6 440 aaKnown RBP21.94■■□□□ 1.1
CTSA-206ENST00000480961 HCFC2Q9Y5Z7 792 aa21.94■■□□□ 1.1
CTSA-206ENST00000480961 A0A0C4DFX4 3053 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 KPNA7A9QM74 516 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 SYN3O14994 580 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 PHACTR2O75167 634 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 EPB41P11171 864 aaKnown RBP21.93■■□□□ 1.1
CTSA-206ENST00000480961 KRT13P13646 458 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 OR1D2P34982 312 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 ARPP19P56211 112 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 NLRP12P59046 1061 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 BIRC3Q13489 604 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 SV2CQ496J9 727 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 TDRD10Q5VZ19 366 aaKnown RBP21.93■■□□□ 1.1
CTSA-206ENST00000480961 MLKLQ8NB16 471 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 APPL2Q8NEU8 664 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 HPDLQ96IR7 371 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.93■■□□□ 1.1
CTSA-206ENST00000480961 TMEM63CQ9P1W3 806 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 FNIP2Q9P278 1114 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 MTRRQ9UBK8 725 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 COG5Q9UP83 839 aa21.93■■□□□ 1.1
CTSA-206ENST00000480961 BICDL2A1A5D9 508 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 MAPK13O15264 365 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 ADH1AP07327 375 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 GCLMP48507 274 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 CLCN4P51793 760 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 CLDN10P78369 228 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 KCNC3Q14003 757 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 MRPL58Q14197 206 aaKnown RBP21.92■■□□□ 1.1
CTSA-206ENST00000480961 CCDC183Q5T5S1 534 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 ANKS3Q6ZW76 656 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 INTS8Q75QN2 995 aaKnown RBP21.92■■□□□ 1.1
CTSA-206ENST00000480961 LRRC52Q8N7C0 313 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 C12orf76Q8N812 135 aaPredicted RBP21.92■■□□□ 1.1
CTSA-206ENST00000480961 ZNF560Q96MR9 790 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 MED15Q96RN5 788 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 THEGQ9P2T0 379 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 CDY1Q9Y6F8 540 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 ATG2AQ2TAZ0 1938 aa21.92■■□□□ 1.1
CTSA-206ENST00000480961 C4BPAP04003 597 aaKnown RBP21.91■■□□□ 1.1
CTSA-206ENST00000480961 ODC1P11926 461 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 PNPLA4P41247 253 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 MYL6P60660 151 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 PPP3CAQ08209 521 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 TRPC3Q13507 836 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 CTXN3Q4LDR2 81 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 WSCD1Q658N2 575 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 CAVIN1Q6NZI2 390 aaKnown RBP21.91■■□□□ 1.1
CTSA-206ENST00000480961 PDXDC1Q6P996 788 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 USP37Q86T82 979 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 GPR65Q8IYL9 337 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 MKNK1Q9BUB5 465 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.91■■□□□ 1.1
CTSA-206ENST00000480961 FBXL5Q9UKA1 691 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 SNX9Q9Y5X1 595 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 BACE2Q9Y5Z0 518 aa21.91■■□□□ 1.1
CTSA-206ENST00000480961 ANK1P16157 1881 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 SLC16A3O15427 465 aaKnown RBP21.9■■□□□ 1.1
CTSA-206ENST00000480961 TGM5O43548 720 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 VNN1O95497 513 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 CDR1P51861 262 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 CREMQ03060 361 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 YWHAHQ04917 246 aaPredicted RBP21.9■■□□□ 1.1
CTSA-206ENST00000480961 RBM43Q6ZSC3 357 aaKnown RBP21.9■■□□□ 1.1
CTSA-206ENST00000480961 SV2AQ7L0J3 742 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 PPFIBP1Q86W92 1011 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 FEZF2Q8TBJ5 459 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 SRRTQ9BXP5 876 aaKnown RBP21.9■■□□□ 1.1
CTSA-206ENST00000480961 RWDD2AQ9UIY3 292 aa21.9■■□□□ 1.1
CTSA-206ENST00000480961 PDCD11Q14690 1871 aaKnown RBP21.9■■□□□ 1.1
CTSA-206ENST00000480961 H7C4K7 107 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms