RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 TDRD10Q5VZ19 366 aaKnown RBP16.32■□□□□ 0.2
ABCF3-213ENST00000480539 LRRC52Q8N7C0 313 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 MLKLQ8NB16 471 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 TMC2Q8TDI7 906 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 SENP8Q96LD8 212 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 KLHL5Q96PQ7 755 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 CDCA3Q99618 268 aaPredicted RBP16.32■□□□□ 0.2
ABCF3-213ENST00000480539 EMILIN2Q9BXX0 1053 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 SSX2IPQ9Y2D8 614 aa16.32■□□□□ 0.2
ABCF3-213ENST00000480539 MYO7AQ13402 2215 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 M0QZQ0 153 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 SYN3O14994 580 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 PHACTR2O75167 634 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 TBX10O75333 385 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 PTMSP20962 102 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 KLRC2P26717 231 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 PNPLA4P41247 253 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 NDUFV1P49821 464 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 RBP5P82980 135 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 KLHL40Q2TBA0 621 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 CCDC40Q4G0X9 1142 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 DCAF17Q5H9S7 520 aaPredicted RBP16.31■□□□□ 0.2
ABCF3-213ENST00000480539 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
ABCF3-213ENST00000480539 TCERG1LQ5VWI1 586 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 USP37Q86T82 979 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 EFHBQ8N7U6 833 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 LNX1Q8TBB1 728 aaPredicted RBP16.31■□□□□ 0.2
ABCF3-213ENST00000480539 CEP63Q96MT8 703 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 MED15Q96RN5 788 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
ABCF3-213ENST00000480539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
ABCF3-213ENST00000480539 MTRRQ9UBK8 725 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 BARX2Q9UMQ3 279 aaPredicted RBP16.31■□□□□ 0.2
ABCF3-213ENST00000480539 R3HCC1Q9Y3T6 440 aaKnown RBP16.31■□□□□ 0.2
ABCF3-213ENST00000480539 COL6A3P12111 3177 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 SCN1AP35498 2009 aa16.31■□□□□ 0.2
ABCF3-213ENST00000480539 KPNA7A9QM74 516 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 CYB561D2O14569 222 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 ADAM12O43184 909 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 ADH1AP07327 375 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 EPCAMP16422 314 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 GCLMP48507 274 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 CLDN10P78369 228 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 CREMQ03060 361 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 TRPC3Q13507 836 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 ZNF280DQ6N043 979 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 ANKS3Q6ZW76 656 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 APPL2Q8NEU8 664 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-213ENST00000480539 ELMO3Q96BJ8 720 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 PABPC5Q96DU9 382 aaKnown RBP16.3■□□□□ 0.2
ABCF3-213ENST00000480539 BORCS6Q96GS4 357 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 HPDLQ96IR7 371 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 CLSTN3Q9BQT9 956 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 RXFP1Q9HBX9 757 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 FNIP2Q9P278 1114 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 DACH1Q9UI36 760 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 HCFC2Q9Y5Z7 792 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 CDY1Q9Y6F8 540 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 PLXNA3P51805 1871 aa16.3■□□□□ 0.2
ABCF3-213ENST00000480539 VNN1O95497 513 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-213ENST00000480539 C4BPAP04003 597 aaKnown RBP16.29■□□□□ 0.2
ABCF3-213ENST00000480539 PIK3CAP42336 1068 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 CLCN4P51793 760 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 AP3M2P53677 418 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 MYL6P60660 151 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 DLX2Q07687 328 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-213ENST00000480539 PPP3CAQ08209 521 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 MYO1EQ12965 1108 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 ADAM15Q13444 863 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 COL19A1Q14993 1142 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 CLUL1Q15846 466 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 STX1AQ16623 288 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 FOXR2Q6PJQ5 311 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 RSPO2Q6UXX9 243 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-213ENST00000480539 C11orf57Q6ZUT1 292 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-213ENST00000480539 HLA-CQ95604 372 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 SRRTQ9BXP5 876 aaKnown RBP16.29■□□□□ 0.2
ABCF3-213ENST00000480539 ARMCX3Q9UH62 379 aaPredicted RBP16.29■□□□□ 0.2
ABCF3-213ENST00000480539 SNX9Q9Y5X1 595 aa16.29■□□□□ 0.2
ABCF3-213ENST00000480539 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 H3BQ06 376 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-213ENST00000480539 H7C4K7 107 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 SLC34A2O95436 690 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 TYMPP19971 482 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 KCNA5P22460 613 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 MXI1P50539 228 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 ARPP19P56211 112 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 TFF2Q03403 129 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 YWHAHQ04917 246 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-213ENST00000480539 NCOA4Q13772 614 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 TPD52L1Q16890 204 aaPredicted RBP16.28■□□□□ 0.2
ABCF3-213ENST00000480539 CTC1Q2NKJ3 1217 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 ZACNQ401N2 412 aa16.28■□□□□ 0.2
ABCF3-213ENST00000480539 CTXN3Q4LDR2 81 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms