RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SPDYE16A6NNV3 312 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 APOL1O14791 398 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 WEE2P0C1S8 567 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 FAM228BP0C875 321 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 COMTP21964 271 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 YWHAHQ04917 246 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 SLC34A1Q06495 639 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PDK2Q15119 407 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 SPDYE2Q495Y8 402 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 LRRC38Q5VT99 294 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 P3H2Q8IVL5 708 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 TATDN2Q93075 761 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 BEGAINQ9BUH8 593 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 STN1Q9H668 368 aaKnown RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 DDX28Q9NUL7 540 aaKnown RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 STMN3Q9NZ72 180 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 COMMD3-BMI1R4GMX3 469 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 NEDD4P46934 1319 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 ABCA8O94911 1581 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 CRB1P82279 1406 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PRR23AA6NEV1 266 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 DTNBO60941 627 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 LRRC14Q15048 493 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RTKN2Q8IZC4 609 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 NCLNQ969V3 563 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 MTMR4Q9NYA4 1195 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 DCDC2Q9UHG0 476 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 F8VZ95 297 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 NCAM2O15394 837 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 SRP72O76094 671 aaKnown RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 ALBP02768 609 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 MAP3K7CLP57077 242 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 NFX1Q12986 1120 aaKnown RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PTK7Q13308 1070 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 MTA1Q13330 715 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 MTERF2Q49AM1 385 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 MEI1Q5TIA1 1274 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 TTC27Q6P3X3 843 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PID1Q7Z2X4 250 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 KIAA2013Q8IYS2 634 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 C7orf31Q8N865 590 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 STK32AQ8WU08 396 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 FSD1LQ9BXM9 530 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 CEP44Q9C0F1 390 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RUBCNLQ9H714 662 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RNPEPL1Q9HAU8 725 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PCDH9Q9HC56 1237 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RBAKQ9NYW8 714 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 SYNPO2Q9UMS6 1093 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 MINPP1Q9UNW1 487 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 A0A087WXM4 84 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 BTNL10A8MVZ5 291 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 TRAPPC3O43617 180 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 IL18RAPO95256 599 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 CACNB1Q02641 598 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 ACAP1Q15027 740 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PARP6Q2NL67 630 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 ACBD5Q5T8D3 534 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 CATSPER4Q7RTX7 472 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 THTPAQ9BU02 230 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 SMYD3Q9H7B4 428 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 BTBD7Q9P203 1132 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 TAGLN3Q9UI15 199 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 COL15A1P39059 1388 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 MYMKA6NI61 221 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 UBAP1LF5GYI3 381 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TNFAIP8O95379 198 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 KRT75O95678 551 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 PDGFRAP16234 1089 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TTC39BQ5VTQ0 682 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RIN2Q8WYP3 895 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 PAGR1Q9BTK6 254 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ANLNQ9NQW6 1124 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 GJB4Q9NTQ9 266 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ASAP1Q9ULH1 1129 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 CEMIPQ8WUJ3 1361 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 MAGEB16A2A368 324 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ERI2A8K979 691 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 H7C0S8 307 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TBC1D4O60343 1298 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 PROSCO94903 275 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ABHD2P08910 425 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RBP1P09455 135 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 CD58P19256 250 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 CLK1P49759 484 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 CTTNQ14247 550 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 EFHC1Q5JVL4 640 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 HHIPL2Q6UWX4 724 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 SRBD1Q8N5C6 995 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 OSCP1Q8WVF1 389 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 C1orf54Q8WWF1 131 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 CFAP36Q96G28 342 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 EIF2AK1Q9BQI3 630 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 LXNQ9BS40 222 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 AP5M1Q9H0R1 490 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ASCC2Q9H1I8 757 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 SEC31BQ9NQW1 1179 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RAD54BQ9Y620 910 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L3A6NCW0 530 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L4A6NCW7 530 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms