RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 UIMC1Q96RL1 719 aa8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 CNPPD1Q9BV87 410 aa8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 PAK6Q9NQU5 681 aaPredicted RBP8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 RASSF1Q9NS23 344 aa8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 TBC1D23Q9NUY8 699 aa8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 TMEM140Q9NV12 185 aa8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 ING3Q9NXR8 418 aa8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 GLI2P10070 1586 aa8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 PBRM1Q86U86 1689 aa8.59□□□□□ -1.03
GAPVD1-217ENST00000479511 GRIN2AQ12879 1464 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 PRG4Q92954 1404 aaPredicted RBP8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 A0A087WZ62 844 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 ALDH1A2O94788 518 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 CRHR1P34998 444 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 MC3RP41968 323 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 TUBP50607 506 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 ARHGAP15Q53QZ3 475 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 FBXO47Q5MNV8 452 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 MZT2BQ6NZ67 158 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 C16orf54Q6UWD8 224 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 CLEC14AQ86T13 490 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 HEATR4Q86WZ0 1026 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 NGDNQ8NEJ9 315 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 FLCNQ8NFG4 579 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 INTS4Q96HW7 963 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 ZNF518BQ9C0D4 1074 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 BLOC1S4Q9NUP1 217 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 CLIC5Q9NZA1 410 aa8.58□□□□□ -1.04
GAPVD1-217ENST00000479511 IQSEC2Q5JU85 1478 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 NUP160Q12769 1436 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 PPRC1Q5VV67 1664 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 A0A0B4J269 797 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 A6NCN8 305 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 PYCARD-AS1I3L0S3 204 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 DYRK3O43781 588 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 PROCP04070 461 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 YBX1P67809 324 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 NOMO3P69849 1222 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 FAM110CQ1W6H9 321 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 GPATCH4Q5T3I0 446 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 FAAH2Q6GMR7 532 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 ZNF280DQ6N043 979 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 BORAQ6PGQ7 559 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 LRRTM4Q86VH4 590 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 CPOQ8IVL8 374 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 VGLL2Q8N8G2 317 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 C1orf131Q8NDD1 294 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 ABHD4Q8TB40 342 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 CASKIN2Q8WXE0 1202 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 UNC45AQ9H3U1 944 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 UBN1Q9NPG3 1134 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 SPATA6Q9NWH7 488 aaPredicted RBP8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 SIDT1Q9NXL6 827 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 RGL1Q9NZL6 768 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 SRP68Q9UHB9 627 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 ZDHHC8Q9ULC8 765 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 ATRNL1Q5VV63 1379 aa8.57□□□□□ -1.04
GAPVD1-217ENST00000479511 ADCY10Q96PN6 1610 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 GRM6O15303 877 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 RNASE1P07998 156 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 ITGA5P08648 1049 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 PTPN7P35236 360 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 ALDH1A3P47895 512 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 ITGA1P56199 1179 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 EIF4HQ15056 248 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 NBPF8Q3BBV2 869 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 PRAMEF14Q5SWL7 426 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 USP49Q70CQ1 688 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 VSIG10LQ86VR7 867 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 PLXDC1Q8IUK5 500 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 COLGALT2Q8IYK4 626 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 STK31Q9BXU1 1019 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 EIF2AQ9BY44 585 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 MLXIPQ9HAP2 919 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 RIC8AQ9NPQ8 531 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 WASH6PQ9NQA3 447 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 JADE2Q9NQC1 790 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 HDAC9Q9UKV0 1011 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 SLC45A1Q9Y2W3 748 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 RABGAP1Q9Y3P9 1069 aa8.56□□□□□ -1.04
GAPVD1-217ENST00000479511 ITIH6Q6UXX5 1313 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 A6NLC8 198 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 KNG1P01042 644 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 ATP1A3P13637 1013 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 KCNQ1P51787 676 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 WNT3AP56704 352 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 KIF22Q14807 665 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 DCAF12L1Q5VU92 463 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 FTSJ3Q8IY81 847 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 ZDHHC14Q8IZN3 488 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 MDM1Q8TC05 714 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 OTUD7AQ8TE49 926 aaPredicted RBP8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 ERP27Q96DN0 273 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 LIN37Q96GY3 246 aaPredicted RBP8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 MYOCQ99972 504 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 GORASP1Q9BQQ3 440 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 KATNAL1Q9BW62 490 aa8.55□□□□□ -1.04
GAPVD1-217ENST00000479511 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.55□□□□□ -1.041e-6■□□□□ 10.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms