RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 FAM126AQ9BYI3 521 aaPredicted RBP7.29□□□□□ -1.24
VCP-205ENST00000479300 TMEM60Q9H2L4 133 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 PDZD7Q9H5P4 517 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 GPRC5CQ9NQ84 441 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 RXFP3Q9NSD7 469 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 SEMA4GQ9NTN9 838 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 MTRRQ9UBK8 725 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 KCNG1Q9UIX4 513 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 GMEB2Q9UKD1 530 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 DNM3Q9UQ16 869 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 MRPS23Q9Y3D9 190 aaKnown RBP7.29□□□□□ -1.24
VCP-205ENST00000479300 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.29□□□□□ -1.24
VCP-205ENST00000479300 CDY1Q9Y6F8 540 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 ANKRD11Q6UB99 2663 aaPredicted RBP7.29□□□□□ -1.24
VCP-205ENST00000479300 PHLPP2Q6ZVD8 1323 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 ASPMQ8IZT6 3477 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 ARHGEF37A1IGU5 675 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 CHURC1-FNTBB4DL54 471 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 K7ESF4 209 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 ARNTLO00327 626 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 MED24O75448 989 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 RECQL4O94761 1208 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 SEC24AO95486 1093 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 PRKCBP05771 671 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 RETP07949 1114 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 CHRNB1P11230 501 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 CYP11B2P19099 503 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 TKTP29401 623 aaKnown RBP7.28□□□□□ -1.24
VCP-205ENST00000479300 NAMPTP43490 491 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 FNTBP49356 437 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 EFNA5P52803 228 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 SLC20A2Q08357 652 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 ZRSR1Q15695 479 aaKnown RBP7.28□□□□□ -1.24
VCP-205ENST00000479300 CSRP2Q16527 193 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 RILPL1Q5EBL4 403 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 N4BP2L1Q5TBK1 243 aaPredicted RBP7.28□□□□□ -1.24
VCP-205ENST00000479300 EEF1DP3Q658K8 133 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 VITQ6UXI7 678 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 PRR23BQ6ZRT6 265 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 Q6ZS52 159 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 CELF5Q8N6W0 485 aaKnown RBP7.28□□□□□ -1.24
VCP-205ENST00000479300 BSNDQ8WZ55 320 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 DNASE1L2Q92874 299 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 SECISBP2LQ93073 1101 aaKnown RBP7.28□□□□□ -1.24
VCP-205ENST00000479300 ELSPBP1Q96BH3 223 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 ASB16Q96NS5 453 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 FZD8Q9H461 694 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 LMAN1LQ9HAT1 526 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 GOLGA2P5Q9HBQ8 144 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 AVENQ9NQS1 362 aaPredicted RBP7.28□□□□□ -1.24
VCP-205ENST00000479300 RBM12Q9NTZ6 932 aaKnown RBP7.28□□□□□ -1.24
VCP-205ENST00000479300 TMEM51Q9NW97 253 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 SNTG2Q9NY99 539 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 GDE1Q9NZC3 331 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 KIAA1024Q9UPX6 916 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 SMC3Q9UQE7 1217 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 BOLA1Q9Y3E2 137 aa7.28□□□□□ -1.24
VCP-205ENST00000479300 PKD1L2Q7Z442 2459 aa7.27□□□□□ -1.24
VCP-205ENST00000479300 FASNP49327 2511 aaKnown RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 WDR27A2RRH5 827 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 CCDC169A6NNP5 214 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 TMEM189-UBE2V1I3L0A0 370 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 K7ERI5 159 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 NCAM2O15394 837 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 MEFVO15553 781 aaPredicted RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 LRP3O75074 770 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 ABLIM3O94929 683 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 THP07101 528 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 SPATA31C1P0DKV0 1188 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 GJA1P17302 382 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 U2AF2P26368 475 aaKnown RBP eCLIP7.27□□□□□ -1.252e-9■□□□□ 11.1
VCP-205ENST00000479300 PRPHP41219 470 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 VIPR2P41587 438 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 BRCC3P46736 316 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 SOX9P48436 509 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 YARSP54577 528 aaKnown RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 ROR1Q01973 937 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 SOX4Q06945 474 aaPredicted RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 ST3GAL1Q11201 340 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 PTGDRQ13258 359 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 SF3A2Q15428 464 aaKnown RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 CCDC6Q16204 474 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 FAM187BQ17R55 369 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 UVSSAQ2YD98 709 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 DCAF4L1Q3SXM0 396 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 GLRA4Q5JXX5 417 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 CDCA2Q69YH5 1023 aaPredicted RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 SMYD5Q6GMV2 418 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 TXNDC11Q6PKC3 985 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 TMEM130Q8N3G9 435 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 RASSF8Q8NHQ8 419 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 TMC2Q8TDI7 906 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 DRC1Q96MC2 740 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 PPP1R10Q96QC0 940 aaKnown RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 CCDC113Q9H0I3 377 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 BHMT2Q9H2M3 363 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 OCEL1Q9H607 264 aa7.27□□□□□ -1.25
VCP-205ENST00000479300 ZNF334Q9HCZ1 680 aaPredicted RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 DDX19AQ9NUU7 478 aaKnown RBP7.27□□□□□ -1.25
VCP-205ENST00000479300 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms