RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 GTF2IRD1Q9UHL9 959 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 EXOC7Q9UPT5 735 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 AKT3Q9Y243 479 aa7.27□□□□□ -1.25
USP48-208ENST00000479177 A0A1W2PQ45 241 aaPredicted RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 A0A1W2PQY0 241 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 KCNJ18B7U540 433 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 TISP43B9A030 160 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 C9orf172C9J069 976 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 KBTBD13C9JR72 458 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 DNM1LO00429 736 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 SLC16A3O15427 465 aaKnown RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 FGFR1OPO95684 399 aaKnown RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 PRKCBP05771 671 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 SRGAP2CP0DJJ0 459 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 GNAT1P11488 350 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 NR2F2P24468 414 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 EEF1GP26641 437 aaKnown RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 GPC3P51654 580 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 ZNF75DP51815 510 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 SNRPFP62306 86 aaKnown RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 FANCCQ00597 558 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 FKBP3Q00688 224 aaKnown RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 MBTD1Q05BQ5 628 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 PTPN11Q06124 597 aaPredicted RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 POU5F1BQ06416 359 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 STRN3Q13033 797 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 MYBPC2Q14324 1141 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 KCNJ12Q14500 433 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 KRT31Q15323 416 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 PKN2Q16513 984 aaKnown RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 TCP11X2Q5H9J9 407 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 PEAR1Q5VY43 1037 aaPredicted RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 TAF2Q6P1X5 1199 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 SERINC5Q86VE9 423 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 ZNF410Q86VK4 478 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 FAM114A1Q8IWE2 563 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 ZBTB8OSQ8IWT0 167 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 SYCP3Q8IZU3 236 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 ARRDC4Q8NCT1 418 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 TMEM174Q8WUU8 243 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 ZNF668Q96K58 619 aaPredicted RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 DEFB118Q96PH6 123 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 CTAGE1Q96RT6 745 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 PPP1R16BQ96T49 567 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 SRRTQ9BXP5 876 aaKnown RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 FAM49AQ9H0Q0 323 aaPredicted RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 RNF208Q9H0X6 261 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 ADAMTS10Q9H324 1103 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 INTS13Q9NVM9 706 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 DMAC2Q9NW81 257 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 LIMA1Q9UHB6 759 aaKnown RBP7.26□□□□□ -1.25
USP48-208ENST00000479177 OGDHLQ9ULD0 1010 aa7.26□□□□□ -1.25
USP48-208ENST00000479177 A0A087WZ62 844 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 A0A0U1RQG5 324 aaPredicted RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 ANKRD63C9JTQ0 380 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 LINC01387J3KSC0 135 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 K7ERI5 159 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 HNRNPDLO14979 420 aaKnown RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 CETN3O15182 167 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 CLIC2O15247 247 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 GPR32O75388 356 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 SMNDC1O75940 238 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP48-208ENST00000479177 AKAP3O75969 853 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 ADCY5O95622 1261 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 RPL13P26373 211 aaKnown RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 ADSSP30520 456 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 LIG4P49917 911 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 COPB1P53618 953 aaKnown RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 ADAM9Q13443 819 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 ITGA7Q13683 1181 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 MAPK6Q16659 721 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 FAM187BQ17R55 369 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 KIZQ2M2Z5 673 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 FAM47CQ5HY64 1035 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 ARMCX5Q6P1M9 558 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 ZPBP2Q6X784 338 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 SRGAP1Q7Z6B7 1085 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 FILIP1Q7Z7B0 1213 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 SLC43A3Q8NBI5 491 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 DNAJB3Q8WWF6 145 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 WNT8BQ93098 351 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 TP53INP1Q96A56 240 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 BICD1Q96G01 975 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 EEF2KMTQ96G04 330 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 MRFAP1L1Q96HT8 127 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 PDLIM2Q96JY6 352 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 GLT1D1Q96MS3 346 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 SCLT1Q96NL6 688 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 OSMRQ99650 979 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 FDXACB1Q9BRP7 624 aaPredicted RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 CBWD1Q9BRT8 395 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 TARS2Q9BW92 718 aaKnown RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 MRPL4Q9BYD3 311 aaKnown RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 TRIM5Q9C035 493 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 XPO4Q9C0E2 1151 aaKnown RBP7.25□□□□□ -1.25
USP48-208ENST00000479177 NIF3L1Q9GZT8 377 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 FZD8Q9H461 694 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 MINDY3Q9H8M7 445 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 IFT122Q9HBG6 1241 aa7.25□□□□□ -1.25
USP48-208ENST00000479177 TAB2Q9NYJ8 693 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms