RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 KCNK13Q9HB14 408 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 ADAMTS6Q9UKP5 1117 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 DOLKQ9UPQ8 538 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 NDC80O14777 642 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 DNAJC6O75061 913 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 TRMUO75648 421 aaKnown RBP22.42■■□□□ 1.18
SDF4-206ENST00000478938 GSTT2P0CG29 244 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 GSTT2BP0CG30 244 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 ATF2P15336 505 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 FGFR2P21802 821 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 ADCY8P40145 1251 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 BCAMP50895 628 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 CALCRLQ16602 461 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 HERC4Q5GLZ8 1057 aaPredicted RBP22.42■■□□□ 1.18
SDF4-206ENST00000478938 ZHX3Q9H4I2 956 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 CHST7Q9NS84 486 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 PCDHGB4Q9UN71 923 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 DMTF1Q9Y222 760 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 PCDHGB5Q9Y5G0 923 aa22.42■■□□□ 1.18
SDF4-206ENST00000478938 MYOCOSA0A1B0GUC4 107 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 TYROBPO43914 113 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 MTMR2Q13614 643 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 ACAP1Q15027 740 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 SGO2Q562F6 1265 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 HP1BP3Q5SSJ5 553 aaPredicted RBP22.41■■□□□ 1.18
SDF4-206ENST00000478938 TMCO4Q5TGY1 634 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 C11orf63Q6NUN7 778 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 ALYREFQ86V81 257 aaKnown RBP22.41■■□□□ 1.18
SDF4-206ENST00000478938 ZC3H3Q8IXZ2 948 aaKnown RBP22.41■■□□□ 1.18
SDF4-206ENST00000478938 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 C12orf50Q8NA57 414 aaPredicted RBP22.41■■□□□ 1.18
SDF4-206ENST00000478938 GDPD5Q8WTR4 605 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 CPVLQ9H3G5 476 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 LRRC19Q9H756 370 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 PLA2G4CQ9UP65 541 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 RREB1Q92766 1687 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 ANKRD62A6NC57 917 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 USP17L12C9JPN9 530 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 USP17L21D6R901 530 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 NDUFB5O43674 189 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 TM7SF2O76062 418 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 RRM1P23921 792 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 RELAQ04206 551 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 ITGA7Q13683 1181 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 KRT25Q7Z3Z0 450 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 ZBTB38Q8NAP3 1195 aaPredicted RBP22.41■■□□□ 1.18
SDF4-206ENST00000478938 BTBD6Q96KE9 485 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 SYT11Q9BT88 431 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 MAK16Q9BXY0 300 aaKnown RBP22.41■■□□□ 1.18
SDF4-206ENST00000478938 SENP6Q9GZR1 1112 aaPredicted RBP22.41■■□□□ 1.18
SDF4-206ENST00000478938 ANKRD2Q9GZV1 360 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 LZTS1Q9Y250 596 aa22.41■■□□□ 1.18
SDF4-206ENST00000478938 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.4■■□□□ 1.18
SDF4-206ENST00000478938 CYP26A1O43174 497 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 SLC37A4O43826 429 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 NFKBIAP25963 317 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 CASP5P51878 434 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 PDE1BQ01064 536 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 RASA2Q15283 850 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 ESCO1Q5FWF5 840 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 SLC2A7Q6PXP3 512 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.4■■□□□ 1.182e-6■■■■■ 27.4
SDF4-206ENST00000478938 GSTCDQ8NEC7 633 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 GPAMQ9HCL2 828 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 S100A14Q9HCY8 104 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 ALS2Q96Q42 1657 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 TNFAIP3P21580 790 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 KDSRQ06136 332 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 KIF22Q14807 665 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 TMEM119Q4V9L6 283 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 FRMD5Q7Z6J6 570 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 TMPRSS6Q8IU80 811 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 TRAIPQ9BWF2 469 aa22.4■■□□□ 1.18
SDF4-206ENST00000478938 AP1G1O43747 822 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 AKAP3O75969 853 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 PDGFRBP09619 1106 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 SLC5A1P13866 664 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 SLC18A1P54219 525 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 NAPAP54920 295 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 ARL4CP56559 192 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 FOLH1Q04609 750 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 DRAP1Q14919 205 aaPredicted RBP22.39■■□□□ 1.17
SDF4-206ENST00000478938 KRT79Q5XKE5 535 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 MTMR9Q96QG7 549 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 TYW1Q9NV66 732 aaKnown RBP22.39■■□□□ 1.17
SDF4-206ENST00000478938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.39■■□□□ 1.171e-6■■■■■ 30.1
SDF4-206ENST00000478938 FRMPD4Q14CM0 1322 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 FBP2O00757 339 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 FGRP09769 529 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 TFPTP0C1Z6 253 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 NAT1P18440 290 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 CTSWP56202 376 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 PDCD4Q53EL6 469 aaKnown RBP22.39■■□□□ 1.17
SDF4-206ENST00000478938 GIPC3Q8TF64 312 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 GJA10Q969M2 543 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 OXNAD1Q96HP4 312 aaPredicted RBP22.39■■□□□ 1.17
SDF4-206ENST00000478938 DCAF5Q96JK2 942 aa22.39■■□□□ 1.17
SDF4-206ENST00000478938 HNRNPABQ99729 332 aaKnown RBP22.39■■□□□ 1.17
SDF4-206ENST00000478938 MRPL1Q9BYD6 325 aaKnown RBP22.39■■□□□ 1.17
SDF4-206ENST00000478938 KIAA1522Q9P206 1035 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms