RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 XRRA1Q6P2D8 792 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 RHBDF2Q6PJF5 856 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 SCARA5Q6ZMJ2 495 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 CEP57Q86XR8 500 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 LRRC71Q8N4P6 559 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 IPO4Q8TEX9 1081 aaKnown RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 TCHPQ9BT92 498 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 FHDC1Q9C0D6 1143 aaPredicted RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 VPS33BQ9H267 617 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 DHX33Q9H6R0 707 aaKnown RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 KCNK9Q9NPC2 374 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 ABCF3Q9NUQ8 709 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 GGA3Q9NZ52 723 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 BTBD7Q9P203 1132 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 TJP2Q9UDY2 1190 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 A0A0B4J269 797 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 F8VP50 259 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 CLTAP09496 248 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 OGDHQ02218 1023 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 MTM1Q13496 603 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 NCOA4Q13772 614 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 CLUL1Q15846 466 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 GNPTABQ3T906 1256 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 C6orf118Q5T5N4 469 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 CYB5D1Q6P9G0 228 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 CAPN12Q6ZSI9 719 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 USP37Q86T82 979 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 FUKQ8N0W3 1084 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 TAB3Q8N5C8 712 aaPredicted RBP11.48□□□□□ -0.57
VPS52-217ENST00000478934 TRAPPC12Q8WVT3 735 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 DYDC1Q8WWB3 177 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 PRPF31Q8WWY3 499 aaKnown RBP11.48□□□□□ -0.57
VPS52-217ENST00000478934 KLRG1Q96E93 195 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 THOC1Q96FV9 657 aaKnown RBP11.48□□□□□ -0.57
VPS52-217ENST00000478934 MTMR12Q9C0I1 747 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 CNOT10Q9H9A5 744 aaKnown RBP11.48□□□□□ -0.57
VPS52-217ENST00000478934 AS3MTQ9HBK9 375 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 NFASCO94856 1347 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 CSDE1O75534 798 aaKnown RBP11.48□□□□□ -0.57
VPS52-217ENST00000478934 RTP1P59025 263 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 MYL6P60660 151 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 ZNF252P-AS1Q0IIN9 211 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 KLF1Q13351 362 aaPredicted RBP11.48□□□□□ -0.57
VPS52-217ENST00000478934 SLMAPQ14BN4 828 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 STXBP2Q15833 593 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 CYP4A22Q5TCH4 519 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 DCAF15Q66K64 600 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 FAM228AQ86W67 206 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 CCDC197Q8NCU1 140 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 ZNF606Q8WXB4 792 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 SLC7A3Q8WY07 619 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 MRRFQ96E11 262 aaKnown RBP11.48□□□□□ -0.57
VPS52-217ENST00000478934 FGFR1OP2Q9NVK5 253 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 SAE1Q9UBE0 346 aaPredicted RBP11.48□□□□□ -0.57
VPS52-217ENST00000478934 PARP2Q9UGN5 583 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 ANAPC5Q9UJX4 755 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 STYXL1Q9Y6J8 313 aa11.48□□□□□ -0.57
VPS52-217ENST00000478934 MYH9P35579 1960 aaKnown RBP11.47□□□□□ -0.57
VPS52-217ENST00000478934 TCP11X1B4DZS4 312 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 PIAS1O75925 651 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 ATF7P17544 494 aaPredicted RBP11.47□□□□□ -0.57
VPS52-217ENST00000478934 CDR1P51861 262 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 CNGA2Q16280 664 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 SPDYCQ5MJ68 293 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 ENOSF1Q7L5Y1 443 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 CEP120Q8N960 986 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 ARHGEF2Q92974 986 aaKnown RBP11.47□□□□□ -0.57
VPS52-217ENST00000478934 SNF8Q96H20 258 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 OSBPL8Q9BZF1 889 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 AVENQ9NQS1 362 aaPredicted RBP11.47□□□□□ -0.57
VPS52-217ENST00000478934 NINJ2Q9NZG7 142 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 IVNS1ABPQ9Y6Y0 642 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 TMEM120BA0PK00 339 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 ZC3H11AO75152 810 aaKnown RBP eCLIP11.47□□□□□ -0.57
VPS52-217ENST00000478934 AGTP01019 485 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 PGK2P07205 417 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 ATF2P15336 505 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 TGFB2P61812 414 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 CYP4F22Q6NT55 531 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 MFSD7Q6UXD7 560 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 TFAP2BQ92481 460 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 TBC1D31Q96DN5 1066 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 MCEEQ96PE7 176 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 WHRNQ9P202 907 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 DNPEPQ9ULA0 475 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 NEU2Q9Y3R4 380 aa11.47□□□□□ -0.57
VPS52-217ENST00000478934 CCT8L1PA6NM43 557 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 BANF1O75531 89 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 FARP2O94887 1054 aaPredicted RBP11.46□□□□□ -0.57
VPS52-217ENST00000478934 ARIH2O95376 493 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 NAMPTP43490 491 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 RAP1GAPP47736 663 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 PTK6Q13882 451 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 P3H1Q32P28 736 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 TNFAIP8L3Q5GJ75 292 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 HIBCHQ6NVY1 386 aaPredicted RBP11.46□□□□□ -0.57
VPS52-217ENST00000478934 VSTM1Q6UX27 236 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 GSTA5Q7RTV2 222 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms