RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 COG5Q9UP83 839 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 AGAP1Q9UPQ3 857 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 ANO9A1A5B4 782 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 FSD2A1L4K1 749 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 LRRIQ3A6PVS8 624 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-215ENST00000478531 PIRO00625 290 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 SPTLC1O15269 473 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 LILRB3O75022 631 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 AKAP3O75969 853 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 GLUD1P00367 558 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 SPATA31D3P0C874 917 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 TRIM49P0CI25 452 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 TRIM49CP0CI26 452 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 ODC1P11926 461 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 LTBRP36941 435 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 TAF6P49848 677 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 KCNQ1P51787 676 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 CLCN4P51793 760 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 ARPP19P56211 112 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 STX17P56962 302 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 DLG4P78352 724 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 CREMQ03060 361 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 ADAM15Q13444 863 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 BIRC3Q13489 604 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 DUOXA2Q1HG44 320 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 CTC1Q2NKJ3 1217 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 EDRF1Q3B7T1 1238 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 SV2CQ496J9 727 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 COBLL1Q53SF7 1204 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 ANKRD40Q6AI12 368 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 SCARA3Q6AZY7 606 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 SPATA31D4Q6ZUB0 917 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 ANKS3Q6ZW76 656 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 USP37Q86T82 979 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 LNX1Q8TBB1 728 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-215ENST00000478531 PLEKHO2Q8TD55 490 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 NELFBQ8WX92 580 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 PIK3R5Q8WYR1 880 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 SENP8Q96LD8 212 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 MFSD14AQ96MC6 490 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 MMRN2Q9H8L6 949 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.44□□□□□ -1.22
BRCA1-215ENST00000478531 SIX4Q9UIU6 781 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 PCDHB8Q9UN66 801 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 CDY1Q9Y6F8 540 aa7.44□□□□□ -1.22
BRCA1-215ENST00000478531 DOCK6Q96HP0 2047 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PPP1R3GB7ZBB8 358 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 M0QZQ0 153 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 SYN3O14994 580 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 CETN3O15182 167 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 ADAM12O43184 909 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PHACTR2O75167 634 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 EPB41P11171 864 aaKnown RBP7.43□□□□□ -1.22
BRCA1-215ENST00000478531 KRT13P13646 458 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 CCNE1P24864 410 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 OR1D2P34982 312 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PSMC2P35998 433 aaKnown RBP7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PNPLA4P41247 253 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 AARSP49588 968 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRCA1-215ENST00000478531 MRPS5P82675 430 aaKnown RBP7.43□□□□□ -1.22
BRCA1-215ENST00000478531 RBP5P82980 135 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 YWHAHQ04917 246 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-215ENST00000478531 LRRC63Q05C16 580 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PAK1Q13153 545 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 COL19A1Q14993 1142 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 NFIL3Q16649 462 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 CTXN3Q4LDR2 81 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 OVOS1Q6IE37 1185 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 CENPPQ6IPU0 288 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 ZNF280DQ6N043 979 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PDXDC1Q6P996 788 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 TRAPPC11Q7Z392 1133 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PPFIBP1Q86W92 1011 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 APPL2Q8NEU8 664 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PARD3BQ8TEW8 1205 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 CASP10Q92851 521 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 GZF1Q9H116 711 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-215ENST00000478531 MAN1C1Q9NR34 630 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 CLEC1BQ9P126 229 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 MTRRQ9UBK8 725 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 CD207Q9UJ71 328 aa7.43□□□□□ -1.22
BRCA1-215ENST00000478531 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 KPNA7A9QM74 516 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 CYB561D2O14569 222 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 TGM5O43548 720 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 MBD3O95983 291 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 CPB1P15086 417 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 PPP1R2P41236 205 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 VAMP7P51809 220 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 CDR1P51861 262 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 MYO1EQ12965 1108 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 TRPC3Q13507 836 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 MYBPC2Q14324 1141 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 AAK1Q2M2I8 961 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 DCAF17Q5H9S7 520 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 RARS2Q5T160 578 aaKnown RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 TCERG1LQ5VWI1 586 aa7.42□□□□□ -1.22
BRCA1-215ENST00000478531 TDRD10Q5VZ19 366 aaKnown RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 PTCRAQ6ISU1 281 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-215ENST00000478531 ANKRD54Q6NXT1 300 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms