RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ZBTB9Q96C00 473 aa4.54□□□□□ -1.68
HPS3-205ENST00000478525 PGBD1Q96JS3 809 aa4.54□□□□□ -1.68
HPS3-205ENST00000478525 MANSC1Q9H8J5 431 aa4.54□□□□□ -1.68
HPS3-205ENST00000478525 CCM2LQ9NUG4 571 aaPredicted RBP4.54□□□□□ -1.68
HPS3-205ENST00000478525 DNAJC28Q9NX36 388 aa4.54□□□□□ -1.68
HPS3-205ENST00000478525 WDR27A2RRH5 827 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 VWC2LB2RUY7 222 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 KCNAB3O43448 404 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 SUN1O94901 812 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 PRR35P0CG20 571 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 MTNR1BP49286 362 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 SLC5A3P53794 718 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 C11orf87Q6NUJ2 197 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 DDX46Q7L014 1031 aaKnown RBP4.53□□□□□ -1.68
HPS3-205ENST00000478525 NLGN4YQ8NFZ3 816 aaPredicted RBP4.53□□□□□ -1.68
HPS3-205ENST00000478525 HAPLN3Q96S86 360 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 C14orf119Q9NWQ9 140 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 DNM3Q9UQ16 869 aa4.53□□□□□ -1.68
HPS3-205ENST00000478525 GPR3P46089 330 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 HNRNPMP52272 730 aaKnown RBP eCLIP4.52□□□□□ -1.69
HPS3-205ENST00000478525 CTXN1P60606 82 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 DYRK1AQ13627 763 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 PREPLQ4J6C6 727 aaPredicted RBP4.52□□□□□ -1.69
HPS3-205ENST00000478525 TMEM119Q4V9L6 283 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 UBR7Q8N806 425 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 SEMA6DQ8NFY4 1073 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 RAB24Q969Q5 203 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 SERGEFQ9UGK8 458 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 NEU2Q9Y3R4 380 aa4.52□□□□□ -1.69
HPS3-205ENST00000478525 GCOM1H8Y6P7 765 aaPredicted RBP4.51□□□□□ -1.69
HPS3-205ENST00000478525 GRM6O15303 877 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 URI1O94763 535 aaPredicted RBP4.51□□□□□ -1.69
HPS3-205ENST00000478525 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 SBK3P0C264 359 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 HOXB6P17509 224 aaKnown RBP4.51□□□□□ -1.69
HPS3-205ENST00000478525 PTGER1P34995 402 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 ANXA11P50995 505 aaKnown RBP4.51□□□□□ -1.69
HPS3-205ENST00000478525 ZNF844Q08AG5 666 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 GRM1Q13255 1194 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 ETFDHQ16134 617 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 ATP2B3Q16720 1220 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 FAM153CQ494X1 144 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 UTP14CQ5TAP6 766 aaKnown RBP4.51□□□□□ -1.69
HPS3-205ENST00000478525 B3GALNT2Q8NCR0 500 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 NSUN7Q8NE18 718 aaKnown RBP4.51□□□□□ -1.69
HPS3-205ENST00000478525 SNX19Q92543 992 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 DPF2Q92785 391 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 DRC1Q96MC2 740 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 ZNF48Q96MX3 618 aaPredicted RBP4.51□□□□□ -1.69
HPS3-205ENST00000478525 KLHL32Q96NJ5 620 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 FCRL4Q96PJ5 515 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 PADI4Q9UM07 663 aa4.51□□□□□ -1.69
HPS3-205ENST00000478525 ADGRA2Q96PE1 1338 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 CCDC195A0A1B0GUA6 201 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 TOR1BO14657 336 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 RHOP08100 348 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 DRD4P21917 467 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
HPS3-205ENST00000478525 FLYWCH1Q4VC44 716 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 TMPRSS9Q7Z410 1059 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 RHOT1Q8IXI2 618 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 CAMKK1Q8N5S9 505 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 LRIG1Q96JA1 1093 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 PBKQ96KB5 322 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 SLC2A13Q96QE2 648 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 C7orf25Q9BPX7 421 aa4.5□□□□□ -1.69
HPS3-205ENST00000478525 LATS1O95835 1130 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 BMP15O95972 392 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 KELP23276 732 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 EPHB2P29323 1055 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 TUBA4AP68366 448 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 TMPRSS15P98073 1019 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 ITIH3Q06033 890 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 TARDBPQ13148 414 aaKnown RBP eCLIP4.49□□□□□ -1.69
HPS3-205ENST00000478525 SUMO4Q6EEV6 95 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 ZNF66Q6ZN08 573 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 CFAP52Q8N1V2 620 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 TMIEQ8NEW7 156 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 FBXO41Q8TF61 875 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 NRG4Q8WWG1 115 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 RPL36ALQ969Q0 106 aaKnown RBP4.49□□□□□ -1.69
HPS3-205ENST00000478525 TMX3Q96JJ7 454 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 KLC4Q9NSK0 619 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 SLC45A2Q9UMX9 530 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 GPR45Q9Y5Y3 372 aa4.49□□□□□ -1.69
HPS3-205ENST00000478525 TRIM38O00635 465 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 ENPP3O14638 875 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 BRINP1O60477 761 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 TTLL1O95922 423 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 MTHFD1P11586 935 aaKnown RBP4.48□□□□□ -1.69
HPS3-205ENST00000478525 NXPH1P58417 271 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 STAT4Q14765 748 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 HLXQ14774 488 aaPredicted RBP4.48□□□□□ -1.69
HPS3-205ENST00000478525 PABPC1LQ4VXU2 614 aaKnown RBP4.48□□□□□ -1.69
HPS3-205ENST00000478525 MORN5Q5VZ52 161 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 NEK8Q86SG6 692 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 WASF1Q92558 559 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 RFKQ969G6 155 aa4.48□□□□□ -1.69
HPS3-205ENST00000478525 AHCYL2Q96HN2 611 aaKnown RBP4.48□□□□□ -1.69
HPS3-205ENST00000478525 PACSIN1Q9BY11 444 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms