RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	TECTA	O75443	2155 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	UBE4B	O95155	1302 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	TTC28	Q96AY4	2481 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	ZNF638	Q14966	1978 aa	Known RBP	4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	LACTBL1	A8MY62	500 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188		H0YCG3	227 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188		J3QL48	77 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	PIR	O00625	290 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	OGT	O15294	1046 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	EIF3D	O15371	548 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	AP1G2	O75843	785 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	CXCL14	O95715	111 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	ALDH2	P05091	517 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	PFKFB1	P16118	471 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	OR1G1	P47890	313 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	CUL4B	Q13620	913 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	STK38	Q15208	465 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	CLUL1	Q15846	466 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	SPOUT1	Q5T280	376 aa	Known RBP	4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	FOXD4L5	Q5VV16	416 aa	Predicted RBP	4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	SPATA1	Q5VX52	437 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	DYM	Q7RTS9	669 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	ZBTB33	Q86T24	672 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	GRAMD1C	Q8IYS0	662 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	ENGASE	Q8NFI3	743 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	PLEKHO2	Q8TD55	490 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	SCFD1	Q8WVM8	642 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	CASP10	Q92851	521 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	CDK5RAP3	Q96JB5	506 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	SUSD3	Q96L08	255 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	TSPAN18	Q96SJ8	248 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	PKMYT1	Q99640	499 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	POMK	Q9H5K3	350 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	IGFLR1	Q9H665	355 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	DZANK1	Q9NVP4	752 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	PARP2	Q9UGN5	583 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	DERA	Q9Y315	318 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	BACE2	Q9Y5Z0	518 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	CUL9	Q8IWT3	2517 aa		4.62	□□□□□ -1.67
POLR2B-208	ENST00000478188	SF3B1	O75533	1304 aa	Known RBP eCLIP	4.62	□□□□□ -1.67	4e-6	■■■■■ 34.5
POLR2B-208	ENST00000478188		A0A1W2PQ27	194 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188		A0A1W2PQ64	194 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188		A0A1W2PQD8	194 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	PODXL	O00592	558 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	FAM13A	O94988	1023 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	CSPG5	O95196	566 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	SSB	P05455	408 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	NFIC	P08651	508 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	CLTA	P09496	248 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	CMA1	P23946	247 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	TKT	P29401	623 aa	Known RBP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	STAT6	P42226	847 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	BRCC3	P46736	316 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	GUCY2F	P51841	1108 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	KRT17	Q04695	432 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	SNW1	Q13573	536 aa	Known RBP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	ZRSR1	Q15695	479 aa	Known RBP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	TMEM259	Q4ZIN3	620 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	SLC8B1	Q6J4K2	584 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	DCLRE1A	Q6PJP8	1040 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	UNC13D	Q70J99	1090 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	SV2B	Q7L1I2	683 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	GPR149	Q86SP6	731 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	BRSK2	Q8IWQ3	736 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	C12orf56	Q8IXR9	622 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	MYCT1	Q8N699	235 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	STAM	Q92783	540 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	FAM84A	Q96KN4	292 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	COLEC11	Q9BWP8	271 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	KCTD10	Q9H3F6	313 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	EPHX3	Q9H6B9	360 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	CCDC39	Q9UFE4	941 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	TICRR	Q7Z2Z1	1910 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	TGM5	O43548	720 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	ABLIM3	O94929	683 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	SLFN14	P0C7P3	912 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	CCNYL3	P0C7X3	344 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	HOXB8	P17481	243 aa	Predicted RBP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	GART	P22102	1010 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	NDUFV1	P49821	464 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	SMTN	P53814	917 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	RNASEL	Q05823	741 aa	Known RBP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	DPYD	Q12882	1025 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	RAB33A	Q14088	237 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	ADAL	Q6DHV7	355 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	JADE1	Q6IE81	842 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	LLGL2	Q6P1M3	1020 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	TMC7	Q7Z402	723 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	HACE1	Q8IYU2	909 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	C12orf76	Q8N812	135 aa	Predicted RBP	4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	EHBP1	Q8NDI1	1231 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	SPATA20	Q8TB22	786 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	HASPIN	Q8TF76	798 aa		4.61	□□□□□ -1.67
POLR2B-208	ENST00000478188	PAGE5	Q96GU1	130 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms