RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 ZNF638Q14966 1978 aaKnown RBP10.55□□□□□ -0.72
CCM2-210ENST00000478169 ANK1P16157 1881 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 KIF26AQ9ULI4 1882 aaPredicted RBP10.55□□□□□ -0.72
CCM2-210ENST00000478169 DENND4CQ5VZ89 1909 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 ATG2BQ96BY7 2078 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 DCDC2BA2VCK2 349 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 HEPACAM2A8MVW5 462 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 M0QZQ0 153 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 ARNTLO00327 626 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 SLC30A4O14863 429 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 CHADO15335 359 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 FOXD2O60548 495 aaPredicted RBP10.54□□□□□ -0.72
CCM2-210ENST00000478169 HIP1RO75146 1068 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 TOM1L1O75674 476 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 OAZ2O95190 189 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 PAPSS2O95340 614 aaPredicted RBP10.54□□□□□ -0.72
CCM2-210ENST00000478169 ADRB1P08588 477 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 MYL4P12829 197 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 CPB1P15086 417 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 CCNE1P24864 410 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
CCM2-210ENST00000478169 GUCY1B3Q02153 619 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 FCHO2Q0JRZ9 810 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 SPEM2Q0P670 501 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 PTGDRQ13258 359 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 PLD1Q13393 1074 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 LRRC32Q14392 662 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 TEAD2Q15562 447 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 PRR23BQ6ZRT6 265 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 YAF2Q8IY57 180 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 DAW1Q8N136 415 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 IGSF22Q8N9C0 903 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 CSGALNACT1Q8TDX6 532 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 SNX29Q8TEQ0 813 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 LLPHQ9BRT6 129 aaKnown RBP10.54□□□□□ -0.72
CCM2-210ENST00000478169 TIPINQ9BVW5 301 aa10.54□□□□□ -0.72
CCM2-210ENST00000478169 C8orf33Q9H7E9 229 aaPredicted RBP10.54□□□□□ -0.72
CCM2-210ENST00000478169 NOL7Q9UMY1 257 aaKnown RBP10.54□□□□□ -0.72
CCM2-210ENST00000478169 CHD8Q9HCK8 2581 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 E9PMD0 336 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 MEFVO15553 781 aaPredicted RBP10.53□□□□□ -0.72
CCM2-210ENST00000478169 EIF5BO60841 1220 aaKnown RBP10.53□□□□□ -0.72
CCM2-210ENST00000478169 GJA1P17302 382 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 LRPAP1P30533 357 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 SATB1Q01826 763 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 YWHAHQ04917 246 aaPredicted RBP10.53□□□□□ -0.72
CCM2-210ENST00000478169 ST3GAL1Q11201 340 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 STRN3Q13033 797 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 MAPK7Q13164 816 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 GNL2Q13823 731 aaKnown RBP10.53□□□□□ -0.72
CCM2-210ENST00000478169 SIM2Q14190 667 aaPredicted RBP10.53□□□□□ -0.72
CCM2-210ENST00000478169 GAS6Q14393 721 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 NOLC1Q14978 699 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCM2-210ENST00000478169 LPAL2Q16609 132 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 SLC10A6Q3KNW5 377 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 DGKKQ5KSL6 1271 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 KRT79Q5XKE5 535 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 RINT1Q6NUQ1 792 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 RNF19BQ6ZMZ0 732 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 FBXO18Q8NFZ0 1043 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 SHKBP1Q8TBC3 707 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 SPIRE2Q8WWL2 714 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 LRRC3Q9BY71 257 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 SLITRK6Q9H5Y7 841 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 PLEKHA5Q9HAU0 1116 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 SEMA4GQ9NTN9 838 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 YIPF1Q9Y548 306 aa10.53□□□□□ -0.72
CCM2-210ENST00000478169 OR6C75A6NL08 312 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 LAD1O00515 517 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 SLC16A4O15374 487 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 HRO43593 1189 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 KRT37O76014 449 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 FGF19O95750 216 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 HARSP12081 509 aaKnown RBP10.52□□□□□ -0.73
CCM2-210ENST00000478169 CYP3A5P20815 502 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 HOXA6P31267 233 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 KPNA1P52294 538 aaPredicted RBP10.52□□□□□ -0.73
CCM2-210ENST00000478169 SMTNP53814 917 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 EPHB3P54753 998 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 GPR17Q13304 367 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 CSRP2Q16527 193 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 ZPBP2Q6X784 338 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 PRR23CQ6ZRP0 262 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 LONP2Q86WA8 852 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 RALGPS2Q86X27 583 aaPredicted RBP10.52□□□□□ -0.73
CCM2-210ENST00000478169 SYNPOQ8N3V7 929 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 KCTD17Q8N5Z5 321 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 ZBTB45Q96K62 511 aaPredicted RBP10.52□□□□□ -0.73
CCM2-210ENST00000478169 TSPAN18Q96SJ8 248 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 RUSC1Q9BVN2 902 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 OBP2AQ9NY56 170 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 TUBGCP4Q9UGJ1 667 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 LIMCH1Q9UPQ0 1083 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 ASB3Q9Y575 518 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.52□□□□□ -0.73
CCM2-210ENST00000478169 TCHHQ07283 1943 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 NCANO14594 1321 aa10.52□□□□□ -0.73
CCM2-210ENST00000478169 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.51□□□□□ -0.73
CCM2-210ENST00000478169 A0A1W2PRU2 124 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms