RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 EPCAMP16422 314 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 TNNI1P19237 187 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 LTBRP36941 435 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 KCNQ1P51787 676 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 STIM1Q13586 685 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 COL19A1Q14993 1142 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 SURF1Q15526 300 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 COBLL1Q53SF7 1204 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 PPP1R15BQ5SWA1 713 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 ANKRD40Q6AI12 368 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 PALB2Q86YC2 1186 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 NT5DC4Q86YG4 428 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 WDR49Q8IV35 697 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 CSGALNACT2Q8N6G5 542 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 LNX1Q8TBB1 728 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-222ENST00000478095 CACTINQ8WUQ7 758 aaKnown RBP11.09□□□□□ -0.63
HDAC6-222ENST00000478095 PIK3R5Q8WYR1 880 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 ANKRD36BP1Q96IX9 119 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 SUSD3Q96L08 255 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 MFSD14AQ96MC6 490 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 CGRRF1Q99675 332 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 TSG101Q99816 390 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 APOL5Q9BWW9 433 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 RXFP1Q9HBX9 757 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 INTS13Q9NVM9 706 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 CLEC1BQ9P126 229 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 COG5Q9UP83 839 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 AGAP1Q9UPQ3 857 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 CTNND2Q9UQB3 1225 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 SSX2IPQ9Y2D8 614 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 FRMD4BQ9Y2L6 1034 aa11.09□□□□□ -0.63
HDAC6-222ENST00000478095 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-222ENST00000478095 LRRIQ3A6PVS8 624 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-222ENST00000478095 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 ADAM12O43184 909 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 ADH1AP07327 375 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 SPATA31D3P0C874 917 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 RPL13P26373 211 aaKnown RBP11.08□□□□□ -0.64
HDAC6-222ENST00000478095 AARSP49588 968 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC6-222ENST00000478095 TAF6P49848 677 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 CLCN4P51793 760 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 STX17P56962 302 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 LILRA4P59901 499 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 DLG4P78352 724 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 BFSP1Q12934 665 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 ADAM9Q13443 819 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 KCNC3Q14003 757 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 MYBPC2Q14324 1141 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 NFIL3Q16649 462 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 DUOXA2Q1HG44 320 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 EDRF1Q3B7T1 1238 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
HDAC6-222ENST00000478095 CENPPQ6IPU0 288 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 RSPO2Q6UXX9 243 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-222ENST00000478095 SPATA31D4Q6ZUB0 917 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 FAM186BQ8IYM0 893 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 CXorf38Q8TB03 319 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 SLC22A17Q8WUG5 538 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 NELFBQ8WX92 580 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 CASP10Q92851 521 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 CLSTN3Q9BQT9 956 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 GTPBP4Q9BZE4 634 aaKnown RBP11.08□□□□□ -0.64
HDAC6-222ENST00000478095 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC6-222ENST00000478095 SIX4Q9UIU6 781 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 ITGA11Q9UKX5 1188 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 REV3LO60673 3130 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 MYO7AQ13402 2215 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 XIRP2A4UGR9 3374 aa11.08□□□□□ -0.64
HDAC6-222ENST00000478095 M0QZQ0 153 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 SYN3O14994 580 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 GLUD1P00367 558 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 TRIM49P0CI25 452 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 TRIM49CP0CI26 452 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 SRGAP2BP0DMP2 458 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 CCNE1P24864 410 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 OR1D2P34982 312 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 PSMC2P35998 433 aaKnown RBP11.07□□□□□ -0.64
HDAC6-222ENST00000478095 ARPP19P56211 112 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 RBP5P82980 135 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 CREMQ03060 361 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 SV2CQ496J9 727 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 TRAPPC11Q7Z392 1133 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 PPFIBP1Q86W92 1011 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 C12orf76Q8N812 135 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-222ENST00000478095 TRIML1Q8N9V2 468 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 APPL2Q8NEU8 664 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 FEZF2Q8TBJ5 459 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 PARD3BQ8TEW8 1205 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 TMEM174Q8WUU8 243 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 DHTKD1Q96HY7 919 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-222ENST00000478095 SENP8Q96LD8 212 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 ZNF560Q96MR9 790 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 MMRN2Q9H8L6 949 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 FNIP2Q9P278 1114 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 MTRRQ9UBK8 725 aa11.07□□□□□ -0.64
HDAC6-222ENST00000478095 R3HCC1Q9Y3T6 440 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms