RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 ARHGEF35A5YM69 484 aa22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 AXIN1O15169 862 aa22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 HOXC13P31276 330 aa22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 RAP1GAPP47736 663 aa22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 CCDC6Q16204 474 aa22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 CENPQQ7L2Z9 268 aaPredicted RBP22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 FAM200AQ8TCP9 573 aa22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 ZMAT2Q96NC0 199 aaKnown RBP22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 SPAG17Q6Q759 2223 aa22.19■■□□□ 1.14
PDLIM1-202ENST00000477757 ANKRD11Q6UB99 2663 aaPredicted RBP22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 CPB1P15086 417 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 KCNE1P15382 129 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 RPL9P32969 192 aaKnown RBP22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 COL9A2Q14055 689 aaPredicted RBP22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 RNF19BQ6ZMZ0 732 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 CACNA2D4Q7Z3S7 1137 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 TMC8Q8IU68 726 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 BEST2Q8NFU1 509 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 WASF1Q92558 559 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 IFT74Q96LB3 600 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 POLR3CQ9BUI4 534 aaPredicted RBP22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 LRRC3Q9BY71 257 aa22.18■■□□□ 1.14
PDLIM1-202ENST00000477757 CCDC163A0A0D9SF12 145 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 A0A1W2PRU2 124 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 DTNBO60941 627 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 RPP40O75818 363 aaKnown RBP22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 KCNK5O95279 499 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 PON2Q15165 354 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 ZNF568Q3ZCX4 644 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 PLA2G2CQ5R387 149 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 APPL2Q8NEU8 664 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 LSM14BQ9BX40 385 aaKnown RBP22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 CNTN3Q9P232 1028 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 ORC3Q9UBD5 711 aaPredicted RBP22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 PCDHGA5Q9Y5G8 931 aa22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 NUP210Q8TEM1 1887 aaPredicted RBP22.17■■□□□ 1.14
PDLIM1-202ENST00000477757 PHLPP2Q6ZVD8 1323 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 EPB41L2O43491 1005 aaKnown RBP22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 CTDNEP1O95476 244 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 MCM4P33991 863 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 OSTNP61366 133 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 PLD1Q13393 1074 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 ARHGAP29Q52LW3 1261 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 KBTBD6Q86V97 674 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 ARID3BQ8IVW6 561 aaPredicted RBP22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 DDX12PQ92771 950 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 KIFAP3Q92845 792 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 C18orf25Q96B23 403 aaPredicted RBP22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 TMEM60Q9H2L4 133 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 PTPRHQ9HD43 1115 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 SH2B1Q9NRF2 756 aaPredicted RBP22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 PDRG1Q9NUG6 133 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 GTSE1Q9NYZ3 720 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 PCDHB8Q9UN66 801 aa22.16■■□□□ 1.14
PDLIM1-202ENST00000477757 EXTL3O43909 919 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 PFKFB2O60825 505 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 AKAP3O75969 853 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 VNN2O95498 520 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 RPA1P27694 616 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 STXBP5Q5T5C0 1151 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 UNQ6494/PRO21346Q6UXR6 183 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 HAUS6Q7Z4H7 955 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 ZFYVE19Q96K21 471 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 TBC1D32Q96NH3 1257 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 LRRC3BQ96PB8 259 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 ACO2Q99798 780 aaKnown RBP22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 MKNK1Q9BUB5 465 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 DNAJC25Q9H1X3 360 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 OBP2AQ9NY56 170 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 SDK1Q7Z5N4 2213 aa22.15■■□□□ 1.14
PDLIM1-202ENST00000477757 K7ERI5 159 aa22.14■■□□□ 1.13
PDLIM1-202ENST00000477757 MPLP40238 635 aa22.14■■□□□ 1.13
PDLIM1-202ENST00000477757 TTC8Q8TAM2 541 aa22.14■■□□□ 1.13
PDLIM1-202ENST00000477757 CITO14578 2027 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 PKD1L2Q7Z442 2459 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 CCDC192P0DO97 292 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 MCF2P10911 925 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 FDPSP14324 419 aaKnown RBP22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 PXNP49023 591 aaPredicted RBP22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 PSAPL1Q6NUJ1 521 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 PKN3Q6P5Z2 889 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 ERMNQ8TAM6 284 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 ACAP3Q96P50 834 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 SMOC1Q9H4F8 434 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 VPS45Q9NRW7 570 aa22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 KIF26AQ9ULI4 1882 aaPredicted RBP22.13■■□□□ 1.13
PDLIM1-202ENST00000477757 C1QTNF9BB2RNN3 333 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 BTBD18B2RXH4 712 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 DPYSL4O14531 572 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 ABLIM1O14639 778 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 MEFVO15553 781 aaPredicted RBP22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 C1QTNF9P0C862 333 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 EPHB3P54753 998 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 PLCB2Q00722 1185 aa22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 YWHAHQ04917 246 aaPredicted RBP22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 DIS3L2Q8IYB7 885 aaKnown RBP22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 ZC3H10Q96K80 434 aaKnown RBP22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 OXCT2Q9BYC2 517 aaPredicted RBP22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 MRPL4Q9BYD3 311 aaKnown RBP22.12■■□□□ 1.13
PDLIM1-202ENST00000477757 CRISPLD1Q9H336 500 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms